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BaseInfo

ncRNA ID	novel_gma_miR6216
Species	Glycine max
Class	miRNA
Genome position	Chr18:54710992-54711157 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1292925
Length	24
Mature sequence(if miRNA)	1 - AUGUGGGAAUGAGGUCUUGUAGUG - 24
Stem-loop(if miRNA)	--   U     U      UUGUA   C     AG A  A      AUUA    U  C       -   -----       AAGACCUA   AUG GGGAA GAGGUC     GUG AGCCA  G UG CUUGCC    AGCU GG UUGGCGU UAU     UAUGAUG        C   ||| ||||| ||||||     ||| |||||  | || ||||||    |||| || ||||||| |||     |||||||   UAC CUCUU CUCCAG     CAC UCGGU  C AC GAACGG    UUGA UC AAUCGUA AUA     GUACUAC        U CG   U     U      --UAA   A     CU A  C      CCAA    -  -       U   UCCUU       CGUACUUU
Stem-loop sequence	AUGUGGGAAUGAGGUCUUGUAGUGCAGCCAAGGAUGACUUGCCAUUAAGCUUGGCUUGGCGUUAUUAUGAUGAAGACCUACUUUUCAUGCCAUCAUGUUCCUAUAUAUGCUAACUAGUUAACCGGCAAGCCAACUCUGGCUACACAAUGACCUCUUUCUCUCAUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014767447.1	ncRNA:24   GUGA--UGUUCUGGAGUAAGGGUGUA   1   ||||--|*||*|=||||||||||||| targets:1326   CACUCUAGAAAAUCUCAUUCCCACAU   1351 Target Full Sequence	3.0	PREDICTED: Glycine max phospholipase D alpha 4-like (LOC100807431), transcript variant X2, mRNA	phospholipase D alpha 4-like(LOC100807431)	coding protein	psRNATarget
XM_003546621.3	ncRNA:24   GUGA--UGUUCUGGAGUAAGGGUGUA   1   ||||--|*||*|=||||||||||||| targets:1326   CACUCUAGAAAAUCUCAUUCCCACAU   1351 Target Full Sequence	3.0	PREDICTED: Glycine max phospholipase D alpha 4-like (LOC100807431), transcript variant X1, mRNA	phospholipase D alpha 4-like(LOC100807431)	coding protein	psRNATarget