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BaseInfo

ncRNA ID novel_gma_miR6214
Species Glycine max
Class miRNA
Genome position Chr4:42017745-42017853 [-]
Reference genome Glycine_max_v2.0
Source SRR1295519
Length 24
Mature sequence(if miRNA) 1 - AUGGUGAGGAUGAGGAGUAACUCU - 24
Stem-loop(if miRNA) --AA      G                                GAAGAUUA    C
    UUAUUC UUAUCCUCACCAUUCAUUUUCUUGGAAUUUAA        GUGA U
    |||||| ||||||||||||||||||||||||||||||||        ||||
    AAUGAG AGUAGGAGUGGUAAGUGAAAGAACUUUAGAUU        CAUU U
UCUC      G                                ---ACCAA    A
Stem-loop sequence AAUUAUUCGUUAUCCUCACCAUUCAUUUUCUUGGAAUUUAAGAAGAUUAGUGACUUAUUACAACCAUUAGAUUUCAAGAAAGUGAAUGGUGAGGAUGAGGAGUAACUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006582750.2
ncRNA:24   UCUCAAUGAGGAGUAGGAGUGGUA   1
  ****|||=|||||*||||||||||
targets:272   CACCUUAUUCCUCCUCCUCACCAU   295

2.5 PREDICTED: Glycine max LRR receptor-like serine/threonine-protein kinase FLS2 (LOC100777473), mRNA LRR receptor-like serine/threonine-protein kinase FLS2(LOC100777473) coding protein psRNATarget
BT098414.1
ncRNA:24   UCUCAAUGAG---GAGUAGGAGUGGUA   1
  *****|||||---||||||||||||||
targets:351   CUUCAUACUCAUCCUCAUCCUCACCAU   377

3.0 Soybean clone JCVI-FLGm-12O10 unknown mRNA NA coding protein psRNATarget