ncRNA ID | novel_gma_miR6214 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:42017745-42017853 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295519 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUGGUGAGGAUGAGGAGUAACUCU - 24 |
Stem-loop(if miRNA) |
--AA      G                                GAAGAUUA    C     UUAUUC UUAUCCUCACCAUUCAUUUUCUUGGAAUUUAA        GUGA U     |||||| ||||||||||||||||||||||||||||||||        ||||     AAUGAG AGUAGGAGUGGUAAGUGAAAGAACUUUAGAUU        CAUU U UCUC      G                                ---ACCAA    A |
Stem-loop sequence | AAUUAUUCGUUAUCCUCACCAUUCAUUUUCUUGGAAUUUAAGAAGAUUAGUGACUUAUUACAACCAUUAGAUUUCAAGAAAGUGAAUGGUGAGGAUGAGGAGUAACUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006582750.2 |
|
2.5 | PREDICTED: Glycine max LRR receptor-like serine/threonine-protein kinase FLS2 (LOC100777473), mRNA | LRR receptor-like serine/threonine-protein kinase FLS2(LOC100777473) | coding protein | psRNATarget | |||||||||
BT098414.1 |
|
3.0 | Soybean clone JCVI-FLGm-12O10 unknown mRNA | NA | coding protein | psRNATarget |