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BaseInfo

ncRNA ID novel_gma_miR6212
Species Glycine max
Class miRNA
Genome position Chr1:49679164-49679242 [+]
Reference genome Glycine_max_v2.0
Source SRR835773
Length 21
Mature sequence(if miRNA) 1 - GUAAGACUGAUACGAAUCAAG - 21
Stem-loop(if miRNA) --     A  G     A     G              GA
  GUAAG CU AUACG AUCAA UUGAUCCGUAUGUU  U
  ||||| || ||||| ||||| ||||||||||||||  A
  UAUUC GA UAUGC UAGUU AACUAGGCAUGCAA  U
GG     C  A     C     G              AU
Stem-loop sequence GUAAGACUGAUACGAAUCAAGUUGAUCCGUAUGUUGAUAUUAAACGUACGGAUCAAGUUGAUCCGUAUAAGCCUUAUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014777888.1
ncRNA:21   GAACUAAGCAUAGUCAGAAUG   1
  |*||||**|||||||||||||
targets:513   CAUGAUAAGUAUCAGUCUUAC   533

2.0 PREDICTED: Glycine max probable serine/threonine-protein kinase At1g18390 (LOC100800873), transcript variant X4, mRNA probable serine/threonine-protein kinase At1g18390(LOC100800873) coding protein psRNATarget
XM_006583366.2
ncRNA:21   GAACUAAGCAUAGUCAGAAUG   1
  |*||||**|||||||||||||
targets:512   CAUGAUAAGUAUCAGUCUUAC   532

2.0 PREDICTED: Glycine max probable serine/threonine-protein kinase At1g18390 (LOC100800873), transcript variant X3, mRNA probable serine/threonine-protein kinase At1g18390(LOC100800873) coding protein psRNATarget
XM_006583356.2
ncRNA:21   GAACUAAGCAUAGUCAGAAUG   1
  |*||||**|||||||||||||
targets:552   CAUGAUAAGUAUCAGUCUUAC   572

2.0 PREDICTED: Glycine max probable receptor-like protein kinase At1g67000 (LOC100796618), transcript variant X3, mRNA probable receptor-like protein kinase At1g67000(LOC100796618) coding protein psRNATarget
XM_014777882.1
ncRNA:21   GAACUAAGCAUAGUCAGAAUG   1
  |*||||**|||||||||||||
targets:528   CAUGAUAAGUAUCAGUCUUAC   548

2.0 PREDICTED: Glycine max probable receptor-like protein kinase At1g67000 (LOC100796618), transcript variant X4, mRNA probable receptor-like protein kinase At1g67000(LOC100796618) coding protein psRNATarget
XM_006583355.2
ncRNA:21   GAACUAAGCAUAGUCAGAAUG   1
  |*||||**|||||||||||||
targets:548   CAUGAUAAGUAUCAGUCUUAC   568

2.0 PREDICTED: Glycine max probable receptor-like protein kinase At1g67000 (LOC100796618), transcript variant X2, mRNA probable receptor-like protein kinase At1g67000(LOC100796618) coding protein psRNATarget