ncRNA ID | novel_gma_miR6204 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr8:726207-726361 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835773 |
Length | 23 |
Mature sequence(if miRNA) | 133 - UGCAUGCCUCUUGUCUUACUUGU - 155 |
Stem-loop(if miRNA) |
--AU   -        U     CU       A    U A      ---      ----------     UUU        --U   UU     GUA GACAAGAG CAUGU  GAUAGCC AGGA G CUUGCC   UAGCUA          UUCCA   UAUGGGAC   UUA  U     ||| |||||||| |||||  ||||||| |||| | ||||||   ||||||          |||||   ||||||||   |||     CAU CUGUUCUC GUACG  UUAUCGG UCCU C GAACGG   AUUGGU          GAGGU   AUACUCUG   AAU  A UGUU   U        C     -U       C    U -      UUA      UUGAUUCCCA     ---        UUU   UA |
Stem-loop sequence | AUGUAGACAAGAGUCAUGUCUGAUAGCCAAGGAUGACUUGCCUAGCUAUUCCAUUUUAUGGGACUUUAUUUAAUUAAUUUGUCUCAUAUGGAGACCCUUAGUUUGGUUAAUUGGCAAGCUUCCUCGGCUAUUUGCAUGCCUCUUGUCUUACUUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014771603.1 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC106797327 (LOC106797327), partial mRNA | uncharacterized LOC106797327(LOC106797327) | coding protein | psRNATarget | |||||||||
XM_014775137.1 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC106798537 (LOC106798537), partial mRNA | uncharacterized LOC106798537(LOC106798537) | coding protein | psRNATarget |