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BaseInfo

ncRNA ID novel_gma_miR6204
Species Glycine max
Class miRNA
Genome position Chr8:726207-726361 [+]
Reference genome Glycine_max_v2.0
Source SRR835773
Length 23
Mature sequence(if miRNA) 133 - UGCAUGCCUCUUGUCUUACUUGU - 155
Stem-loop(if miRNA) --AU   -        U     CU       A    U A      ---      ----------     UUU        --U   UU
    GUA GACAAGAG CAUGU  GAUAGCC AGGA G CUUGCC   UAGCUA          UUCCA   UAUGGGAC   UUA  U
    ||| |||||||| |||||  ||||||| |||| | ||||||   ||||||          |||||   ||||||||   |||
    CAU CUGUUCUC GUACG  UUAUCGG UCCU C GAACGG   AUUGGU          GAGGU   AUACUCUG   AAU  A
UGUU   U        C     -U       C    U -      UUA      UUGAUUCCCA     ---        UUU   UA
Stem-loop sequence AUGUAGACAAGAGUCAUGUCUGAUAGCCAAGGAUGACUUGCCUAGCUAUUCCAUUUUAUGGGACUUUAUUUAAUUAAUUUGUCUCAUAUGGAGACCCUUAGUUUGGUUAAUUGGCAAGCUUCCUCGGCUAUUUGCAUGCCUCUUGUCUUACUUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771603.1
ncRNA:23   UGUUCAUUCUGUUCUCCGUACGU   1
  =|||||*|*||||||||||||||
targets:989   GCAAGUUAAACAAGAGGCAUGCA   1011

2.0 PREDICTED: Glycine max uncharacterized LOC106797327 (LOC106797327), partial mRNA uncharacterized LOC106797327(LOC106797327) coding protein psRNATarget
XM_014775137.1
ncRNA:23   UGUUCAUUCUGUUCUCCGUACGU   1
  =|||||*|*||||||||||||||
targets:1256   GCAAGUUAAACAAGAGGCAUGCA   1278

2.0 PREDICTED: Glycine max uncharacterized LOC106798537 (LOC106798537), partial mRNA uncharacterized LOC106798537(LOC106798537) coding protein psRNATarget