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BaseInfo

ncRNA ID novel_gma_miR6203
Species Glycine max
Class miRNA
Genome position Chr8:3896599-3896712 [+]
Reference genome Glycine_max_v2.0
Source SRR835773
Length 22
Mature sequence(if miRNA) 93 - GCUCUCUAUACUUCUGUCAUCA - 114
Stem-loop(if miRNA) --U         -              U  -   U       ---------U  UAUAAUAU
   UGACAGAAG AUAGAGAGCACAGA GA UGA AUGCAUA          UA        A
   ||||||||| |||||||||||||| || ||| |||||||          ||        U
   ACUGUCUUC UAUCUCUCGUGUUU CU AUU UACGUGU          UC        A
ACU         A              C  C   C       UAAGUAGUAC  AAGGGACG
Stem-loop sequence UUGACAGAAGAUAGAGAGCACAGAUGAUGAUAUGCAUAUUAUAUAAUAUAUAGCAGGGAACUCAUGAUGAAUUGUGCAUCUUACUCCUUUGUGCUCUCUAUACUUCUGUCAUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014774400.1
ncRNA:22   ACUACUGUCUUCAUAUCUCUCG   1
  *|=|||||||=|||||||||||
targets:3467   AGGUGACAGAGGUAUAGAGAGC   3488

1.5 PREDICTED: Glycine max probable LRR receptor-like serine/threonine-protein kinase At2g16250 (LOC100805769), mRNA probable LRR receptor-like serine/threonine-protein kinase At2g16250(LOC100805769) coding protein psRNATarget
NM_001251353.2
ncRNA:22   ACUACUGUCUUCAUAUCUCUCG   1
  **|||*|||=||||||||||||
targets:529   CUAUGUCAGGAGUAUAGAGAGC   550

2.5 Glycine max uncharacterized LOC100527585 (LOC100527585), mRNA uncharacterized LOC100527585(LOC100527585) coding protein psRNATarget
BT092436.1
ncRNA:22   ACUACUGUCUUCAUAUCUCUCG   1
  **|||*|||=||||||||||||
targets:531   CUAUGUCAGGAGUAUAGAGAGC   552

2.5 Soybean clone JCVI-FLGm-10N20 unknown mRNA NA coding protein psRNATarget