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BaseInfo

ncRNA ID	novel_gma_miR6199
Species	Glycine max
Class	miRNA
Genome position	Chr6:11081987-11082122 [+]
Reference genome	Glycine_max_v2.0
Source	SRR835773
Length	24
Mature sequence(if miRNA)	113 - AAUCUCAGGGACCAAAUUGACAGC - 136
Stem-loop(if miRNA)	--          A                   A C         C       --CCAUCCUAAUA  UA   UGUCAAUUUG UCCCUGAGAUUUAAAAAAU U AAAAUGAUU UCGACUU             UC  A   |||||||||| ||||||||||||||||||| | ||||||||| |||||||             ||   ACAGUUAAAC AGGGACUCUAAAUUUUUUA A UUUUAUUAA AGCUGAA             AG  C CG          C                   C U         A       AUAUAAAACAAAC  UA
Stem-loop sequence	UGUCAAUUUGAUCCCUGAGAUUUAAAAAAUAUCAAAAUGAUUCUCGACUUCCAUCCUAAUAUCUAACAUGACAAACAAAAUAUAAAGUCGAAAAUUAUUUUUACAUUUUUUAAAUCUCAGGGACCAAAUUGACAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014762042.1	ncRNA:23   GACAGUUAAACCAGGGACUCUAA   1   =*|*||||||*|||||||||||| targets:1   UAGGCAAUUUAGUCCCUGAGAUU   23 Target Full Sequence	1.5	PREDICTED: Glycine max U3 small nucleolar ribonucleoprotein protein MPP10-like (LOC102662559), mRNA	U3 small nucleolar ribonucleoprotein protein MPP10-like(LOC102662559)	coding protein	psRNATarget
XM_014776676.1	ncRNA:24   CGACAGUUAAACCAGGGACUCUAA   1   *=*|*||||||*|||||||||||| targets:4   AUAGGCAAUUUAGUCCCUGAGAUU   27 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC102665129 (LOC102665129), mRNA	uncharacterized LOC102665129(LOC102665129)	coding protein	psRNATarget
XM_006582433.2	ncRNA:22   ACAGUUAAACCAGGGACUCUAA   1   *|*||||||*|||||||||||| targets:1   AGGCAAUUUAGUCCCUGAGAUU   22 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC102663519 (LOC102663519), mRNA	uncharacterized LOC102663519(LOC102663519)	coding protein	psRNATarget
XM_006573370.2	ncRNA:22   ACAGUUAAACCAGGGACUCUAA   1   *|*||||||*|||||||||||| targets:1   AGGCAAUUUAGUCCCUGAGAUU   22 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC102665919 (LOC102665919), mRNA	uncharacterized LOC102665919(LOC102665919)	coding protein	psRNATarget
XM_014769769.1	ncRNA:24   CGACAGUUAAACCAGGGACUCUAA   1   *=*|*||||||*|||||||||||| targets:191   AUAGGCAAUUUAGUCCCUGAGAUU   214 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC102668781 (LOC102668781), transcript variant X1, mRNA	uncharacterized LOC102668781(LOC102668781)	coding protein	psRNATarget
AK245209.1	ncRNA:24   CGACAGUUAA-ACCAGGGACUCUAA   1   ***||*||||-|||||||||||||| targets:2826   UGGGUGAAUUAUGGUCCCUGAGAUU   2850 Target Full Sequence	3.0	Glycine max cDNA, clone: GMFL01-23-N04	NA	coding protein	psRNATarget
XM_003543599.3	ncRNA:24   CGACAGUUAA-ACCAGGGACUCUAA   1   ***||*||||-|||||||||||||| targets:2893   UGGGUGAAUUAUGGUCCCUGAGAUU   2917 Target Full Sequence	3.0	PREDICTED: Glycine max heat shock 70 kDa protein 14 (LOC100813658), mRNA	heat shock 70 kDa protein 14(LOC100813658)	coding protein	psRNATarget