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BaseInfo

ncRNA ID novel_gma_miR6190
Species Glycine max
Class miRNA
Genome position Chr19:772648-772736 [-]
Reference genome Glycine_max_v2.0
Source SRR835773
Length 23
Mature sequence(if miRNA) 67 - AAUGAUAUUAGUAUUGUUCCGGA - 89
Stem-loop(if miRNA) --      A      UU    CG         U          A
  AAUGAU UUAGUA  GUUC  GAUUGAGUG UUUGGAAUGC U
  |||||| ||||||  ||||  ||||||||| |||||||||| A
  UUACUA AAUCAU  UAAG  UUAACUCAU AGACUUUGUG U
CC      C      UU    AU         U          U
Stem-loop sequence AAUGAUAUUAGUAUUGUUCCGGAUUGAGUGUUUUGGAAUGCAUAUUGUGUUUCAGAUUACUCAAUUUAGAAUUUUACUAACAUCAUUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003552266.3
ncRNA:23   AGGCCUUGUUAUGAUUAUAGUAA   1
  ||=||||*|*||||||||||||*
targets:1536   UCUGGAAAAUUACUAAUAUCAUA   1558

3.0 PREDICTED: Glycine max protein FATTY ACID EXPORT 3, chloroplastic-like (LOC100808049), mRNA protein FATTY ACID EXPORT 3, chloroplastic-like(LOC100808049) coding protein psRNATarget
AK285165.1
ncRNA:23   AGGCCUUGUUAUGAUUAUAGUAA   1
  |*=**||==||||||||||||||
targets:414   UAUCAAAUGAUACUAAUAUCAUU   436

3.0 Glycine max cDNA, clone: GMFL01-03-G07 NA coding protein psRNATarget