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BaseInfo

ncRNA ID novel_gma_miR6185
Species Glycine max
Class miRNA
Genome position Chr10:1745326-1745443 [+]
Reference genome Glycine_max_v2.0
Source SRR835773
Length 21
Mature sequence(if miRNA) 1 - UUGGAUAAUGAUUGUCACGUG - 21
Stem-loop(if miRNA) --      A   AU     C          C     AAAU    ACUCC      --     AA
  UUGGAU AUG  UGUCA GUGUCAUGUU UGAUU    GUCA     AUGAAA  GAUAG  U
  |||||| |||  ||||| |||||||||| |||||    ||||     ||||||  |||||
  AAUCUA UAC  ACAGU CACAGUACAA ACUAA    CAGU     UACUUU  UUGUU  G
AU      C   CG     A          C     ---C    -----      UG     AA
Stem-loop sequence UUGGAUAAUGAUUGUCACGUGUCAUGUUCUGAUUAAAUGUCAACUCCAUGAAAGAUAGAAUGAAUUGUUGUUUUCAUUGACCAAUCACAACAUGACACAUGACAGCCAUCAUCUAAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006602607.2
ncRNA:21   GUGCACUGUUAGUAAUAGGUU   1
  |||*||||||*||||||||||
targets:651   CACAUGACAAACAUUAUCCAA   671

2.5 PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA transcription factor TGA7-like(LOC100794752) coding protein psRNATarget
XM_003555842.3
ncRNA:21   GUGCACUGUUAGUAAUAGGUU   1
  |||*|**||||||||||||||
targets:2213   CACAUUUCAAUCAUUAUCCAA   2233

3.0 PREDICTED: Glycine max serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform (LOC100811658), mRNA serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform(LOC100811658) coding protein psRNATarget