ncRNA ID | novel_gma_miR6185 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:1745326-1745443 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835773 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUGGAUAAUGAUUGUCACGUG - 21 |
Stem-loop(if miRNA) |
--      A   AU     C          C     AAAU    ACUCC      --     AA   UUGGAU AUG  UGUCA GUGUCAUGUU UGAUU    GUCA     AUGAAA  GAUAG  U   |||||| |||  ||||| |||||||||| |||||    ||||     ||||||  |||||   AAUCUA UAC  ACAGU CACAGUACAA ACUAA    CAGU     UACUUU  UUGUU  G AU      C   CG     A          C     ---C    -----      UG     AA |
Stem-loop sequence | UUGGAUAAUGAUUGUCACGUGUCAUGUUCUGAUUAAAUGUCAACUCCAUGAAAGAUAGAAUGAAUUGUUGUUUUCAUUGACCAAUCACAACAUGACACAUGACAGCCAUCAUCUAAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006602607.2 |
|
2.5 | PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA | transcription factor TGA7-like(LOC100794752) | coding protein | psRNATarget | |||||||||
XM_003555842.3 |
|
3.0 | PREDICTED: Glycine max serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform (LOC100811658), mRNA | serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform(LOC100811658) | coding protein | psRNATarget |