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BaseInfo

ncRNA ID novel_gma_miR6176
Species Glycine max
Class miRNA
Genome position Chr16:11393923-11394003 [-]
Reference genome Glycine_max_v2.0
Source SRR835773
Length 21
Mature sequence(if miRNA) 1 - AAAUCAUUGCAUAUAAUUUUU - 21
Stem-loop(if miRNA) --                        C   A     UA  
  AAAUUAUAUGCAAUGAUUUUUUUG UAA AAAAU  UAU
  |||||||||||||||||||||||| ||| |||||  ||G
  UUUAAUAUACGUUACUAAAAAAAU GUU UUUUA  AUC
UU                        C   C     GC  
Stem-loop sequence AAAUUAUAUGCAAUGAUUUUUUUGCUAAAAAAAUUAUAUGCUACGAUUUUCUUGCUAAAAAAAUCAUUGCAUAUAAUUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003532937.3
ncRNA:21   UUUUUAAUAUACGUUACUAAA   1
  =||||||*||||||||*||||
targets:3170   GAAAAUUUUAUGCAAUUAUUU   3190

2.5 PREDICTED: Glycine max importin-4-like (LOC100795772), transcript variant X1, mRNA importin-4-like(LOC100795772) coding protein psRNATarget
XM_006605356.2
ncRNA:21   UUUUUAAUAUACGUUACUAAA   1
  ***|||||||*||||||||||
targets:8499   UCCAAUUAUAAGCAAUGAUUU   8519

2.5 PREDICTED: Glycine max sacsin-like (LOC100818243), mRNA sacsin-like(LOC100818243) coding protein psRNATarget
XM_003533641.3
ncRNA:21   UUUUUAAUAUACGUUACUAAA   1
  ***|||||||*||||||||||
targets:8492   UCCAAUUAUAAGCAAUGAUUU   8512

2.5 PREDICTED: Glycine max sacsin-like (LOC100789980), mRNA sacsin-like(LOC100789980) coding protein psRNATarget