ncRNA ID | novel_gma_miR6176 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr16:11393923-11394003 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835773 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AAAUCAUUGCAUAUAAUUUUU - 21 |
Stem-loop(if miRNA) |
--                        C   A     UA     AAAUUAUAUGCAAUGAUUUUUUUG UAA AAAAU  UAU   |||||||||||||||||||||||| ||| |||||  ||G   UUUAAUAUACGUUACUAAAAAAAU GUU UUUUA  AUC UU                        C   C     GC   |
Stem-loop sequence | AAAUUAUAUGCAAUGAUUUUUUUGCUAAAAAAAUUAUAUGCUACGAUUUUCUUGCUAAAAAAAUCAUUGCAUAUAAUUUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003532937.3 |
|
2.5 | PREDICTED: Glycine max importin-4-like (LOC100795772), transcript variant X1, mRNA | importin-4-like(LOC100795772) | coding protein | psRNATarget | |||||||||
XM_006605356.2 |
|
2.5 | PREDICTED: Glycine max sacsin-like (LOC100818243), mRNA | sacsin-like(LOC100818243) | coding protein | psRNATarget | |||||||||
XM_003533641.3 |
|
2.5 | PREDICTED: Glycine max sacsin-like (LOC100789980), mRNA | sacsin-like(LOC100789980) | coding protein | psRNATarget |