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BaseInfo

ncRNA ID novel_gma_miR6174
Species Glycine max
Class miRNA
Genome position Chr15:41840000-41840061 [-]
Reference genome Glycine_max_v2.0
Source SRR835773
Length 24
Mature sequence(if miRNA) 39 - AGAAAGUCAGGCUUCAAAGACGGU - 62
Stem-loop(if miRNA) --    A   A     - A      GUG   AC
  AGAA GUC GGCUU C AAGACG   UUG  A
  |||| ||| ||||| | ||||||   |||
  UCUU CGG CUGAA G UUCUGU   AGC  U
AA    -   A     A A      --A   AC
Stem-loop sequence AGAAAGUCAGGCUUCAAAGACGGUGUUGACAUCACGAAUGUCUUAGAAAGUCAGGCUUCUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014768553.1
ncRNA:24   UGGCAGAAACUUCGGACUGAAAGA   1
  =|=|-|*|||||||=|||||||||
targets:801   GCUG-CAUUGAAGCUUGACUUUCU   823

2.5 PREDICTED: Glycine max F-box/kelch-repeat protein At3g06240-like (LOC100815838), mRNA F-box/kelch-repeat protein At3g06240-like(LOC100815838) coding protein psRNATarget
XM_014767691.1
ncRNA:24   UGGCAGAAACUUCGGACUGAAAGA   1
  =**|*=||||||||||||||||*|
targets:372   GAAGAUUUUGAAGCCUGACUUUAU   395

2.5 PREDICTED: Glycine max uncharacterized LOC106796129 (LOC106796129), mRNA uncharacterized LOC106796129(LOC106796129) coding protein psRNATarget
XM_003518269.3
ncRNA:24   UGGCAGAAACUUCGGACUGAAAGA   1
  *****=|||||||*||||||||||
targets:1610   UAAUAUUUUGAAGACUGACUUUCU   1633

2.5 PREDICTED: Glycine max uncharacterized protein At5g39865-like (LOC100810320), mRNA uncharacterized protein At5g39865-like(LOC100810320) coding protein psRNATarget