ncRNA ID | novel_gma_miR6173 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:9204498-9204584 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835773 |
Length | 22 |
Mature sequence(if miRNA) | 66 - UCUACCGGAAGAACCUUCUUCU - 87 |
Stem-loop(if miRNA) |
--       G                -A     A  C      A   AAGAAGG UCUUCCGGUAGAACAA  UGUUC UC GGAAGA C   ||||||| ||||||||||||||||  ||||| || ||||||   UUCUUCC AGAAGGCCAUCUUGUU  AUAAG AG CCUUCU C UC       A                AA     A  A      U |
Stem-loop sequence | AAGAAGGGUCUUCCGGUAGAACAAAUGUUCAUCCGGAAGAACCUUCUUCCAGAAGAAUAAAUUGUUCUACCGGAAGAACCUUCUUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006573284.2 |
|
2.5 | PREDICTED: Glycine max aquaporin PIP1-2-like (LOC100781984), mRNA | aquaporin PIP1-2-like(LOC100781984) | coding protein | psRNATarget | |||||||||
XM_006596704.2 |
|
2.5 | PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102666208), mRNA | serine/threonine-protein phosphatase 7 long form homolog(LOC102666208) | coding protein | psRNATarget |