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BaseInfo

ncRNA ID novel_gma_miR6173
Species Glycine max
Class miRNA
Genome position Chr14:9204498-9204584 [+]
Reference genome Glycine_max_v2.0
Source SRR835773
Length 22
Mature sequence(if miRNA) 66 - UCUACCGGAAGAACCUUCUUCU - 87
Stem-loop(if miRNA) --       G                -A     A  C      A
  AAGAAGG UCUUCCGGUAGAACAA  UGUUC UC GGAAGA C
  ||||||| ||||||||||||||||  ||||| || ||||||
  UUCUUCC AGAAGGCCAUCUUGUU  AUAAG AG CCUUCU C
UC       A                AA     A  A      U
Stem-loop sequence AAGAAGGGUCUUCCGGUAGAACAAAUGUUCAUCCGGAAGAACCUUCUUCCAGAAGAAUAAAUUGUUCUACCGGAAGAACCUUCUUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006573284.2
ncRNA:22   UCUUCUUCCAAGAAGGCCAUCU   1
  =|||||||||||||||||*||*
targets:1821   GGAAGAAGGUUCUUCCGGAAGU   1842

2.5 PREDICTED: Glycine max aquaporin PIP1-2-like (LOC100781984), mRNA aquaporin PIP1-2-like(LOC100781984) coding protein psRNATarget
XM_006596704.2
ncRNA:22   UCUUCUUCCAAGAAGGCCAUCU   1
  *||||||||||||||||*|||=
targets:215   CGAAGAAGGUUCUUCCGCUAGG   236

2.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102666208), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102666208) coding protein psRNATarget