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BaseInfo

ncRNA ID novel_gma_miR6169
Species Glycine max
Class miRNA
Genome position Chr1:6848899-6849009 [+]
Reference genome Glycine_max_v2.0
Source SRR835773
Length 21
Mature sequence(if miRNA) 1 - UGUCAAACUUGCAAGAUGAUA - 21
Stem-loop(if miRNA) --                     U     U AUA      A  A    GA   GCAA
  UGUCAAACUUGCAAGAUGAUA UAUUA G   GUUGGA GC UUCA  AUA    G
  ||||||||||||||||||||| ||||| |   |||||| || ||||  |||
  AUAGUUUGAAUGUUCUACUAU AUAAU C   CAACCU UG GAGU  UAU    A
AC                     U     C --A      A  A    -G   AACU
Stem-loop sequence UGUCAAACUUGCAAGAUGAUAUUAUUAUGAUAGUUGGAAGCAUUCAGAAUAGCAAGAUCAAUAUGUGAGAGUAUCCAACACCUAAUAUUAUCAUCUUGUAAGUUUGAUACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014772809.1
ncRNA:21   AUAGUAGAACGUUCAAACUGU   1
  **|==*|||||||||||||||
targets:832   ACUUGACUUGCAAGUUUGACA   852

3.0 PREDICTED: Glycine max uncharacterized LOC100811466 (LOC100811466), transcript variant X4, mRNA uncharacterized LOC100811466(LOC100811466) coding protein psRNATarget
XM_014772810.1
ncRNA:21   AUAGUAGAACGUUCAAACUGU   1
  **|==*|||||||||||||||
targets:832   ACUUGACUUGCAAGUUUGACA   852

3.0 PREDICTED: Glycine max uncharacterized LOC100811466 (LOC100811466), transcript variant X5, mRNA uncharacterized LOC100811466(LOC100811466) coding protein psRNATarget