ncRNA ID | novel_gma_miR6169 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:6848899-6849009 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835773 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGUCAAACUUGCAAGAUGAUA - 21 |
Stem-loop(if miRNA) |
--                     U     U AUA      A  A    GA   GCAA   UGUCAAACUUGCAAGAUGAUA UAUUA G   GUUGGA GC UUCA  AUA    G   ||||||||||||||||||||| ||||| |   |||||| || ||||  |||   AUAGUUUGAAUGUUCUACUAU AUAAU C   CAACCU UG GAGU  UAU    A AC                     U     C --A      A  A    -G   AACU |
Stem-loop sequence | UGUCAAACUUGCAAGAUGAUAUUAUUAUGAUAGUUGGAAGCAUUCAGAAUAGCAAGAUCAAUAUGUGAGAGUAUCCAACACCUAAUAUUAUCAUCUUGUAAGUUUGAUACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014772809.1 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC100811466 (LOC100811466), transcript variant X4, mRNA | uncharacterized LOC100811466(LOC100811466) | coding protein | psRNATarget | |||||||||
XM_014772810.1 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC100811466 (LOC100811466), transcript variant X5, mRNA | uncharacterized LOC100811466(LOC100811466) | coding protein | psRNATarget |