ncRNA ID | novel_gma_miR6163 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:4189222-4189361 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835772 |
Length | 24 |
Mature sequence(if miRNA) | 117 - AAUACGAGAACAGCUUGAAAACGA - 140 |
Stem-loop(if miRNA) |
--CUUUC               CUU              A                      C    AAU        CAAGUUGUUCUUGUG   UUCUUUUAAAACUA GUCGUUUUGAGAGUUGUGUUAA AUUU   U        |||||||||||||||   |||||||||||||| |||||||||||||||||||||| ||||        GUUCGACAAGAGCAU   AAGGAAGUUUUGAU CAGCAAAACUUUUAACACAAUU UAAA   A AGCAAAA               AAU              G                      A    AGU |
Stem-loop sequence | CUUUCCAAGUUGUUCUUGUGCUUUUCUUUUAAAACUAAGUCGUUUUGAGAGUUGUGUUAACAUUUAAUUAUGAAAAUAUUAACACAAUUUUCAAAACGACGUAGUUUUGAAGGAAUAAUACGAGAACAGCUUGAAAACGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014776853.1 |
|
2.5 | PREDICTED: Glycine max protein argonaute 4A-like (LOC100812218), mRNA | protein argonaute 4A-like(LOC100812218) | coding protein | psRNATarget |