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BaseInfo

ncRNA ID novel_gma_miR6157
Species Glycine max
Class miRNA
Genome position Chr20:4157542-4157592 [-]
Reference genome Glycine_max_v2.0
Source SRR835772
Length 24
Mature sequence(if miRNA) 1 - CUGGAAAUAGAAAAUGGUGAUAGA - 24
Stem-loop(if miRNA) --UU G UU              UU
    U G  GUUUUCUGUUUUCA  C
    | |  ||||||||||||||  U
    A U  UAAAAGAUAAAGGU  C
AGAU G GG              CA
Stem-loop sequence UUUGGUUGUUUUCUGUUUUCAUUCUCACUGGAAAUAGAAAAUGGUGAUAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014778211.1
ncRNA:24   AGAUAGUGGUAAAAGAUAAAGGUC   1
  *||-|||||||||||*|||||||*
targets:178   ACU-UCACCAUUUUCCAUUUCCAU   200

2.5 PREDICTED: Glycine max dihydrolipoyl dehydrogenase 2, chloroplastic-like (LOC100809578), transcript variant X2, mRNA dihydrolipoyl dehydrogenase 2, chloroplastic-like(LOC100809578) coding protein psRNATarget
XM_014778210.1
ncRNA:24   AGAUAGUGGUAAAAGAUAAAGGUC   1
  *||-|||||||||||*|||||||*
targets:179   ACU-UCACCAUUUUCCAUUUCCAU   201

2.5 PREDICTED: Glycine max dihydrolipoyl dehydrogenase 2, chloroplastic-like (LOC100809578), transcript variant X1, mRNA dihydrolipoyl dehydrogenase 2, chloroplastic-like(LOC100809578) coding protein psRNATarget
XM_006583942.2
ncRNA:24   AGAUAGUGGUAAAAGAUAAAGGUC   1
  *||-|||||||||||*|||||||*
targets:177   ACU-UCACCAUUUUCCAUUUCCAU   199

2.5 PREDICTED: Glycine max dihydrolipoyl dehydrogenase 2, chloroplastic-like (LOC100809578), transcript variant X3, mRNA dihydrolipoyl dehydrogenase 2, chloroplastic-like(LOC100809578) coding protein psRNATarget