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BaseInfo

ncRNA ID	novel_gma_miR6145
Species	Glycine max
Class	miRNA
Genome position	Chr18:12245484-12245660 [+]
Reference genome	Glycine_max_v2.0
Source	SRR835772
Length	21
Mature sequence(if miRNA)	1 - UAGGAGAGAAAAAUAAGAAGA - 21
Stem-loop(if miRNA)	--                   GA             AC                         U    GAAGUUAAA GAGAGAGUUUCAAU   UAGGAGAGAAAAAUAAGAA  UAAAAUGAAUUAA  UUCUCCCAUAAGUUAAAAUCAGCUU UGGA         U              A   |||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||| ||||         |              A   AUCUUCUUUUUUUAUUCUU  AUUUUACUUAAUU  AGGAGGGUGUUCAAUUUUAGUUGAA ACUU         A              A AG                   AC             CU                         U    --------G AGUUGAAAAUUAGA
Stem-loop sequence	UAGGAGAGAAAAAUAAGAAGAUAAAAUGAAUUAAACUUCUCCCAUAAGUUAAAAUCAGCUUUUGGAGAAGUUAAAUGAGAGAGUUUCAAUAAAAGAUUAAAAGUUGAAGUUCAUAAGUUGAUUUUAACUUGUGGGAGGAUCUUAAUUCAUUUUACAUUCUUAUUUUUUUCUUCUAGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK244755.1	ncRNA:21   AGAAGAAUAAAAAGAGAGGAU   1   |=||||||||||||||||*|| targets:84   UUUUCUUAUUUUUCUCUCAUA   104 Target Full Sequence	1.5	Glycine max cDNA, clone: GMFL01-13-C08	NA	coding protein	psRNATarget
XM_006599056.2	ncRNA:21   AGAAGAAUAAAAAGAGAGGAU   1   |||||||*||*|||||||||| targets:30   UCUUCUUCUUCUUCUCUCCUA   50 Target Full Sequence	2.5	PREDICTED: Glycine max rop guanine nucleotide exchange factor 14-like (LOC100777675), transcript variant X1, mRNA	rop guanine nucleotide exchange factor 14-like(LOC100777675)	coding protein	psRNATarget
XM_006599057.2	ncRNA:21   AGAAGAAUAAAAAGAGAGGAU   1   |||||||*||*|||||||||| targets:30   UCUUCUUCUUCUUCUCUCCUA   50 Target Full Sequence	2.5	PREDICTED: Glycine max rop guanine nucleotide exchange factor 14-like (LOC100777675), transcript variant X2, mRNA	rop guanine nucleotide exchange factor 14-like(LOC100777675)	coding protein	psRNATarget
XM_014778062.1	ncRNA:21   AGAA-GAAUAAAAAGAGAGGAU   1   |=||-||*|||||||||||||| targets:151   UUUUGCUAAUUUUUCUCUCCUA   172 Target Full Sequence	3.0	PREDICTED: Glycine max deSI-like protein At4g17486 (LOC100802465), transcript variant X3, mRNA	deSI-like protein At4g17486(LOC100802465)	coding protein	psRNATarget
XM_003528728.3	ncRNA:21   AGAAGAAUAAAAAGAGAGGAU   1   |=||=||*||||||||||||* targets:1891   UUUUUUUUUUUUUCUCUCCUU   1911 Target Full Sequence	3.0	PREDICTED: Glycine max cytochrome P450 78A3 (LOC100798388), mRNA	cytochrome P450 78A3(LOC100798388)	coding protein	psRNATarget
XM_003520743.3	ncRNA:21   AGAAGAAUAAAAAGAGAGGAU   1   |=||=||*||||||||||||* targets:823   UUUUUUUUUUUUUCUCUCCUC   843 Target Full Sequence	3.0	PREDICTED: Glycine max transcription factor bHLH149-like (LOC100813766), mRNA	transcription factor bHLH149-like(LOC100813766)	coding protein	psRNATarget