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BaseInfo

ncRNA ID novel_gma_miR6142
Species Glycine max
Class miRNA
Genome position Chr1:30102460-30102574 [-]
Reference genome Glycine_max_v2.0
Source SRR835772
Length 24
Mature sequence(if miRNA) 92 - GAGAGCUUUCCGGAAGACCUGUUC - 115
Stem-loop(if miRNA) ---GA                    -------           -UC  UUCAUUACCUCUGG
     GAGCUUUCCGGAAGACCUGU       UCUUCCGGAAG   GU              A
     ||||||||||||||||||||       |||||||||||   ||
     CUCGGAAGGCCUUCUGGGCA       AGAAGGCCUUC   AG              A
UGCCA                    AUCCCCA           UAA  GCCUUCUUCCCAAG
Stem-loop sequence GAGAGCUUUCCGGAAGACCUGUUCUUCCGGAAGUCGUUUCAUUACCUCUGGAAGAACCCUUCUUCCGGAAAUCUUCCGGAAGAACCCCUAACGGGUCUUCCGGAAGGCUCACCGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006581123.2
ncRNA:24   CUUGUCCAGAAGGCCUUUCGAGAG   1
  ||=-=||||||||*|||||||||*
targets:1445   GAG-GGGUCUUCCUGAAAGCUCUG   1467

2.5 PREDICTED: Glycine max BEL1-like homeodomain protein 7 (LOC100807409), transcript variant X3, mRNA BEL1-like homeodomain protein 7(LOC100807409) coding protein psRNATarget
XM_014777218.1
ncRNA:24   CUUGUCCAGAAGGCCUUUCGAGAG   1
  ||=-=||||||||*|||||||||*
targets:1456   GAG-GGGUCUUCCUGAAAGCUCUG   1478

2.5 PREDICTED: Glycine max BEL1-like homeodomain protein 7 (LOC100807409), transcript variant X2, mRNA BEL1-like homeodomain protein 7(LOC100807409) coding protein psRNATarget
XM_014777217.1
ncRNA:24   CUUGUCCAGAAGGCCUUUCGAGAG   1
  ||=-=||||||||*|||||||||*
targets:1540   GAG-GGGUCUUCCUGAAAGCUCUG   1562

2.5 PREDICTED: Glycine max BEL1-like homeodomain protein 7 (LOC100807409), transcript variant X1, mRNA BEL1-like homeodomain protein 7(LOC100807409) coding protein psRNATarget
XM_003527630.3
ncRNA:24   CUUGUCCAGAAGGCCUUUCGAGAG   1
  ||=-=||||||||*|||||||||*
targets:1452   GAG-GGGUCUUCCUGAAAGCUCUG   1474

2.5 PREDICTED: Glycine max BEL1-like homeodomain protein 7 (LOC100807409), transcript variant X4, mRNA BEL1-like homeodomain protein 7(LOC100807409) coding protein psRNATarget