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BaseInfo

ncRNA ID novel_gma_miR6140
Species Glycine max
Class miRNA
Genome position Chr2:27024697-27024747 [+]
Reference genome Glycine_max_v2.0
Source SRR1295519;SRR1451609;SRR1294476
Length 24
Mature sequence(if miRNA) 1 - UCUUAAAUGCAUACGUCGGGCGCC - 24
Stem-loop(if miRNA) --     AAU   U    -      CC
  UCUUA   GCA ACGU CGGGCG  A
  |||||   ||| |||| ||||||
  AGAAU   UGU UGUA GCCCGU  U
GA     -CU   -    A      UG
Stem-loop sequence UCUUAAAUGCAUACGUCGGGCGCCAUGUUGCCCGAAUGUUGUUCUAAGAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003523641.3
ncRNA:24   CCGCGGGCUGCAUACGUAAAUUCU   1
  **=*|||*||*|||||||||||||
targets:2617   AUUUCCCAACUUAUGCAUUUAAGA   2640

2.0 PREDICTED: Glycine max G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 (LOC100782258), mRNA G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5(LOC100782258) coding protein psRNATarget