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BaseInfo

ncRNA ID	novel_gma_miR6139
Species	Glycine max
Class	miRNA
Genome position	Chr15:7648881-7648980 [-]
Reference genome	Glycine_max_v2.0
Source	SRR835772
Length	21
Mature sequence(if miRNA)	1 - UAUGUAUAAGCUAAUUUUAAC - 21
Stem-loop(if miRNA)	--C                C       -----AAUA  --  UUUGGAGAAGC    AAAAUUAGCUUAUGCA AAGUUAA         AG  CU           U    |||||||||||||||| |||||||         ||  ||           A    UUUUAAUCGAAUAUGU UUCGAUU         CU  UC           A CAA                A       AAACAUCUU  AG  UCCAGAAAGUA
Stem-loop sequence	CAAAAUUAGCUUAUGCACAAGUUAAAAUAAGCUUUUGGAGAAGCUAAAUGAAAGACCUCUGAUCUUCUACAAAUUAGCUUAUGUAUAAGCUAAUUUUAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014779022.1	ncRNA:21   CAAUUUUAAUCGAAUAUGUAU   1   ||||||||||||||||||||| targets:574   GUUAAAAUUAGCUUAUACAUA   594 Target Full Sequence	0.0	PREDICTED: Glycine max cysteine synthase-like (LOC100796465), transcript variant X4, mRNA	cysteine synthase-like(LOC100796465)	coding protein	psRNATarget
XM_014779020.1	ncRNA:21   CAAUUUUAAUCGAAUAUGUAU   1   ||||||||||||||||||||| targets:660   GUUAAAAUUAGCUUAUACAUA   680 Target Full Sequence	0.0	PREDICTED: Glycine max cysteine synthase-like (LOC100796465), transcript variant X2, mRNA	cysteine synthase-like(LOC100796465)	coding protein	psRNATarget
XM_014779021.1	ncRNA:21   CAAUUUUAAUCGAAUAUGUAU   1   ||||||||||||||||||||| targets:684   GUUAAAAUUAGCUUAUACAUA   704 Target Full Sequence	0.0	PREDICTED: Glycine max cysteine synthase-like (LOC100796465), transcript variant X3, mRNA	cysteine synthase-like(LOC100796465)	coding protein	psRNATarget
XM_014779019.1	ncRNA:21   CAAUUUUAAUCGAAUAUGUAU   1   ||||||||||||||||||||| targets:770   GUUAAAAUUAGCUUAUACAUA   790 Target Full Sequence	0.0	PREDICTED: Glycine max cysteine synthase-like (LOC100796465), transcript variant X1, mRNA	cysteine synthase-like(LOC100796465)	coding protein	psRNATarget
XM_014769500.1	ncRNA:21   CAAUUUUAAUCGAAUAUGUAU   1   |*||||||||||||||=|||| targets:672   GCUAAAAUUAGCUUAUGCAUA   692 Target Full Sequence	1.5	PREDICTED: Glycine max RHOMBOID-like protein 12, mitochondrial (LOC102659796), mRNA	RHOMBOID-like protein 12, mitochondrial(LOC102659796)	coding protein	psRNATarget
BT091672.1	ncRNA:21   CAAUUUUAAUCGAAUAUGUAU   1   *|||||||||*|||||||||| targets:433   AUUAAAAUUAACUUAUACAUA   453 Target Full Sequence	1.5	Soybean clone JCVI-FLGm-8F3 unknown mRNA	NA	coding protein	psRNATarget
XM_006591822.2	ncRNA:21   CAAUUUUAAUCGAAUAUGUAU   1   |*|||||*||||||||=|||| targets:800   GCUAAAAAUAGCUUAUGCAUA   820 Target Full Sequence	2.5	PREDICTED: Glycine max BAH and coiled-coil domain-containing protein 1-like (LOC100800993), transcript variant X2, mRNA	BAH and coiled-coil domain-containing protein 1-like(LOC100800993)	coding protein	psRNATarget
XM_014764339.1	ncRNA:21   CAAUUUUAAUCGAAUAUGUAU   1   |*|||||*||||||||=|||| targets:800   GCUAAAAAUAGCUUAUGCAUA   820 Target Full Sequence	2.5	PREDICTED: Glycine max BAH and coiled-coil domain-containing protein 1-like (LOC100800993), transcript variant X1, mRNA	BAH and coiled-coil domain-containing protein 1-like(LOC100800993)	coding protein	psRNATarget
XM_003538903.3	ncRNA:21   CAAUUUUAAUCGAAUAUGUAU   1   ***||||||||||||*||||| targets:516   CCCAAAAUUAGCUUACACAUA   536 Target Full Sequence	2.5	PREDICTED: Glycine max aquaporin TIP1-2-like (LOC100804160), mRNA	aquaporin TIP1-2-like(LOC100804160)	coding protein	psRNATarget
XM_003540577.3	ncRNA:21   CAAUUUUAAUCGAAUAUGUAU   1   ***||||||||||||*||||| targets:459   CCCAAAAUUAGCUUACACAUA   479 Target Full Sequence	2.5	PREDICTED: Glycine max probable aquaporin PIP2-6 (LOC100794978), mRNA	probable aquaporin PIP2-6(LOC100794978)	coding protein	psRNATarget