Search result

BaseInfo

ncRNA ID novel_gma_miR6136
Species Glycine max
Class miRNA
Genome position Chr1:6361652-6361712 [+]
Reference genome Glycine_max_v2.0
Source SRR835772
Length 24
Mature sequence(if miRNA) 1 - UUCUUCCGGAAGUAGUUUGUGGGU - 24
Stem-loop(if miRNA) --            --U        GGU    C
  UUCUUCCGGAAG   AGUUUGUG   ACUU U
  ||||||||||||   ||||||||   ||||
  AAGAAGGCCUUC   UUAAACAC   UGAA G
GG            UUC        ---    G
Stem-loop sequence UUCUUCCGGAAGUAGUUUGUGGGUACUUCUGGAAGUCACAAAUUCUUCUUCCGGAAGAAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006573284.2
ncRNA:24   UGGGUGUUUGAUGAAGGCCUUCUU   1
  |||||*|||||||||||||||*||
targets:1752   ACCCAGAAACUACUUCCGGAAAAA   1775

2.5 PREDICTED: Glycine max aquaporin PIP1-2-like (LOC100781984), mRNA aquaporin PIP1-2-like(LOC100781984) coding protein psRNATarget