ncRNA ID | novel_gma_miR6133 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr19:689540-689682 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835771 |
Length | 24 |
Mature sequence(if miRNA) | 120 - AGGGACAACACAAACAUUCAGCAU - 143 |
Stem-loop(if miRNA) |
--    --UU                          C  AUUAAAAAUCUCU        G    A       U   GUUG    UUUGUGUUGUUCCUCCAAAAUGACGU GU             AAAAUGAC UUGU UUAAAAG U   ||||    |||||||||||||||||||||||||| ||             |||||||| |||| ||||||| G   CGAC    AAACACAACAGGGAGGUUUUACUGCA CA             UUUUGCUG AACA AAUUUUC U UA    UUAC                          U  ----AAACUAAUU        G    A       A |
Stem-loop sequence | GUUGUUUUUGUGUUGUUCCUCCAAAAUGACGUCGUAUUAAAAAUCUCUAAAAUGACGUUGUAUUAAAAGUUGUACUUUUAAAACAAGGUCGUUUUUUAAUCAAAACUACGUCAUUUUGGAGGGACAACACAAACAUUCAGCAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003519481.3 |
|
3.0 | PREDICTED: Glycine max protein ALTERED XYLOGLUCAN 4-like (LOC100814460), mRNA | protein ALTERED XYLOGLUCAN 4-like(LOC100814460) | coding protein | psRNATarget |