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BaseInfo

ncRNA ID	novel_gma_miR6118
Species	Glycine max
Class	miRNA
Genome position	Chr17:6139086-6139308 [-]
Reference genome	Glycine_max_v2.0
Source	SRR835771
Length	21
Mature sequence(if miRNA)	203 - CUAGGAGAAGAAAAUAAGAAG - 223
Stem-loop(if miRNA)	--  A G      AA         A     U               -     CUUAAA                      ----G               U  C         UU AG   CU G AGAAGA  AUAAGAAGA AAAAA AAAAUGAGUUUUUUC CUAAG      UGAGUUUUUUAUUAGUUAAUUA     UAGUUAAUUUGUAGA GU UUCUCAUAU  U  A   || | ||||||  ||||||||| ||||| ||||||||||||||| |||||      ||||||||||||||||||||||     ||||||||||||||| || |||||||||  |   GA U UCUUUU  UAUUCUUCU UUUUU UUUUACUUAAAAAAG GGUUC      ACUCAAAAAGUAAUCGAUUAGU     AUUAAUUAAAUAUCU UA AGGAGUAUA  G  G AA  G G      --         C     C               U     ------                      AAUUA               U  A         UU AA
Stem-loop sequence	CUAGGAGAAGAAAAUAAGAAGAAAAAAAUAAAAUGAGUUUUUUCCUAAGCUUAAAUGAGUUUUUUAUUAGUUAAUUAGUAGUUAAUUUGUAGAUGUCUUCUCAUAUUUUAGAGAAGUUAUAUGAGGAAAUUUCUAUAAAUUAAUUAAUUAAUGAUUAGCUAAUGAAAAACUCACUUGGUGAAAAAAUUCAUUUUCUUUUUCUCUUCUUAUUUUUCUGUGAGAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006574366.2	ncRNA:21   GAAGAAUAAAAGAAGAGGAUC   1   |||=||||||||||||||||* targets:1444   CUUUUUAUUUUCUUCUCCUAU   1464 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100798622 (LOC100798622), transcript variant X1, mRNA	uncharacterized LOC100798622(LOC100798622)	coding protein	psRNATarget
XM_014773518.1	ncRNA:21   GAAGAAUAAAAGAAGAGGAUC   1   |||||||||||||||||=||* targets:27   CUUCUUAUUUUCUUCUCUUAC   47 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102663984 (LOC102663984), mRNA	uncharacterized LOC102663984(LOC102663984)	coding protein	psRNATarget
XM_003541946.3	ncRNA:21   GAAGAAUAAAAGAAGAGGAUC   1   =||||||||||||||||=||* targets:2271   UUUCUUAUUUUCUUCUCUUAU   2291 Target Full Sequence	2.5	PREDICTED: Glycine max protein SAND-like (LOC100814534), transcript variant X2, mRNA	protein SAND-like(LOC100814534)	coding protein	psRNATarget
XM_014763075.1	ncRNA:21   GAAGAAUAAAAGAAGAGGAUC   1   ||||*||||||||||||=||| targets:4044   CUUCCUAUUUUCUUCUCUUAG   4064 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X1, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763079.1	ncRNA:21   GAAGAAUAAAAGAAGAGGAUC   1   ||||*||||||||||||=||| targets:3955   CUUCCUAUUUUCUUCUCUUAG   3975 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X5, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763077.1	ncRNA:21   GAAGAAUAAAAGAAGAGGAUC   1   ||||*||||||||||||=||| targets:3943   CUUCCUAUUUUCUUCUCUUAG   3963 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X3, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763076.1	ncRNA:21   GAAGAAUAAAAGAAGAGGAUC   1   ||||*||||||||||||=||| targets:3812   CUUCCUAUUUUCUUCUCUUAG   3832 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X2, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763080.1	ncRNA:21   GAAGAAUAAAAGAAGAGGAUC   1   ||||*||||||||||||=||| targets:3707   CUUCCUAUUUUCUUCUCUUAG   3727 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X6, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget