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BaseInfo

ncRNA ID novel_gma_miR6114
Species Glycine max
Class miRNA
Genome position Chr16:2090765-2090860 [-]
Reference genome Glycine_max_v2.0
Source SRR835771
Length 21
Mature sequence(if miRNA) 1 - UGAAAUUCCAAUUCUGAUCGA - 21
Stem-loop(if miRNA) --A                      A     -C   UUAACAAAGGUU
   AUCAGAAUUGGAGUUUCAUCUU GUAAU  AGU            U
   |||||||||||||||||||||| |||||  |||            G
   UAGUCUUAACCUUAAAGUGGAA UAUUA  UAC            U
AGC                      C     AA   AACCGUAAAUCA
Stem-loop sequence AAUCAGAAUUGGAGUUUCAUCUUAGUAAUCAGUUUAACAAAGGUUUGUACUAAAUGCCAACAUAAAUUAUCAAGGUGAAAUUCCAAUUCUGAUCGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006578644.2
ncRNA:21   AGCUAGUCUUAACCUUAAAGU   1
  *|*||||||||||||||||||
targets:1722   CCUAUCAGAAUUGGAAUUUCA   1742

1.0 PREDICTED: Glycine max uncharacterized LOC100782782 (LOC100782782), transcript variant X2, mRNA uncharacterized LOC100782782(LOC100782782) coding protein psRNATarget
XM_003523098.3
ncRNA:21   AGCUAGUCUUAACCUUAAAGU   1
  *|*||||||||||||||||||
targets:1809   CCUAUCAGAAUUGGAAUUUCA   1829

1.0 PREDICTED: Glycine max uncharacterized LOC100782782 (LOC100782782), transcript variant X1, mRNA uncharacterized LOC100782782(LOC100782782) coding protein psRNATarget
XM_006585459.2
ncRNA:21   AGCUAGUCUUAACCUUAAAGU   1
  |||||||||||||||=|||||
targets:182   UCGAUCAGAAUUGGAGUUUCA   202

1.5 PREDICTED: Glycine max phospholipase D alpha 4-like (LOC100812642), transcript variant X3, mRNA phospholipase D alpha 4-like(LOC100812642) coding protein psRNATarget
XM_006581801.2
ncRNA:21   AGCUAGUCUUAACCUUAAAGU   1
  *|*|||||||||||||||||*
targets:1806   CCUAUCAGAAUUGGAAUUUCC   1826

2.0 PREDICTED: Glycine max uncharacterized LOC100819515 (LOC100819515), mRNA uncharacterized LOC100819515(LOC100819515) coding protein psRNATarget
XM_003544018.3
ncRNA:21   AGCUAGUCUUAACCUUAAAGU   1
  ||*||||||||||||=|||||
targets:1172   UCUAUCAGAAUUGGAGUUUCA   1192

2.5 PREDICTED: Glycine max LOB domain-containing protein 21-like (LOC100777635), mRNA LOB domain-containing protein 21-like(LOC100777635) coding protein psRNATarget