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BaseInfo

ncRNA ID	novel_gma_miR6112
Species	Glycine max
Class	miRNA
Genome position	Chr16:7111441-7111662 [-]
Reference genome	Glycine_max_v2.0
Source	SRR835771
Length	21
Mature sequence(if miRNA)	202 - CUAGGAGAAGAAAAUAAGAAG - 222
Stem-loop(if miRNA)	--              U    A   AAAAAA         A                    ACUC         AAA  -            U    -----    -------C    AUC   CUAGGAGAAGAAAA AAGA GAA      GGAAAUGAG UUCUCCAUAAGCUAAAAUGA    UCCAUUAGC   CU AUUAGCUAAUUU UAGA     UGUC        UCUC   U   |||||||||||||| |||| |||      ||||||||| ||||||||||||||||||||    |||||||||   || |||||||||||| ||||     ||||        ||||   GAUUCUCUUUUUUU UUCU CUU      CUUUUACUC AAGAGGUAUUCGAUUUUACU    AGGUAAUCG   GA UAAUCGAUUAAA AUCU     ACAG        AGAG   U AA              U    -   -----G         G                    CAAA         -AG  G            C    UCGAA    UAUAUUUA    AUU
Stem-loop sequence	CUAGGAGAAGAAAAUAAGAAGAAAAAAAAGGAAAUGAGAUUCUCCAUAAGCUAAAAUGAACUCUCCAUUAGCAAACUAUUAGCUAAUUUUUAGAUGUCCUCUCAUCUUUUAGAGAAUUUAUAUGACAAAGCUUCUACAAAUUAGCUAAUGAGGAGCUAAUGGAAAACUCAUUUUAGCUUAUGGAGAAGCUCAUUUUCGUUCUCUUUUUUUUUUCUCUUAGAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006574366.2	ncRNA:21   GAAGAAUAAAAGAAGAGGAUC   1   |||=||||||||||||||||* targets:1444   CUUUUUAUUUUCUUCUCCUAU   1464 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100798622 (LOC100798622), transcript variant X1, mRNA	uncharacterized LOC100798622(LOC100798622)	coding protein	psRNATarget
XM_014773518.1	ncRNA:21   GAAGAAUAAAAGAAGAGGAUC   1   |||||||||||||||||=||* targets:27   CUUCUUAUUUUCUUCUCUUAC   47 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102663984 (LOC102663984), mRNA	uncharacterized LOC102663984(LOC102663984)	coding protein	psRNATarget
XM_003541946.3	ncRNA:21   GAAGAAUAAAAGAAGAGGAUC   1   =||||||||||||||||=||* targets:2271   UUUCUUAUUUUCUUCUCUUAU   2291 Target Full Sequence	2.5	PREDICTED: Glycine max protein SAND-like (LOC100814534), transcript variant X2, mRNA	protein SAND-like(LOC100814534)	coding protein	psRNATarget
XM_014763075.1	ncRNA:21   GAAGAAUAAAAGAAGAGGAUC   1   ||||*||||||||||||=||| targets:4044   CUUCCUAUUUUCUUCUCUUAG   4064 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X1, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763079.1	ncRNA:21   GAAGAAUAAAAGAAGAGGAUC   1   ||||*||||||||||||=||| targets:3955   CUUCCUAUUUUCUUCUCUUAG   3975 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X5, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763077.1	ncRNA:21   GAAGAAUAAAAGAAGAGGAUC   1   ||||*||||||||||||=||| targets:3943   CUUCCUAUUUUCUUCUCUUAG   3963 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X3, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763076.1	ncRNA:21   GAAGAAUAAAAGAAGAGGAUC   1   ||||*||||||||||||=||| targets:3812   CUUCCUAUUUUCUUCUCUUAG   3832 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X2, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763080.1	ncRNA:21   GAAGAAUAAAAGAAGAGGAUC   1   ||||*||||||||||||=||| targets:3707   CUUCCUAUUUUCUUCUCUUAG   3727 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X6, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget