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BaseInfo

ncRNA ID novel_gma_miR6106
Species Glycine max
Class miRNA
Genome position Chr14:42647834-42647960 [+]
Reference genome Glycine_max_v2.0
Source SRR835771;SRR835772
Length 24
Mature sequence(if miRNA) 1 - UUCUUAUUGGAUGAUGACGGUCAC - 24
Stem-loop(if miRNA) --            G       U A     CAUGA        ---    U   -CUUU     AGA
  UUCUUAUUGGAU AUGACGG C CAUGU     UCUGAUUG   GAUG CAA     AUGGA   U
  |||||||||||| ||||||| | |||||     ||||||||   |||| |||     |||||
  AAGAAUAACUUA UACUGUU G GUACA     AGAUUAAC   UUAC GUU     UAUUU   G
AC            A       - -     -CAAG        UGG    U   AUUGU     AGA
Stem-loop sequence UUCUUAUUGGAUGAUGACGGUCACAUGUCAUGAUCUGAUUGGAUGUCAACUUUAUGGAAGAUGAGAUUUAUUGUUAUUGUCAUUGGUCAAUUAGAGAACACAUGGUUGUCAUAAUUCAAUAAGAACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI410445.1
ncRNA:24   CACUGGCAGUAGUAGGUUAUUCUU   1
  |*|=|*||=|||||||||||||||
targets:164   GCGGCAGUUAUCAUCCAAUAAGAA   187

2.0 Sequence 8570 from Patent EP2074227 NA coding protein psRNATarget
LQ242575.1
ncRNA:24   CACUGGCAGUAGUAGGUUAUUCUU   1
  |*|=|*||=|||||||||||||||
targets:164   GCGGCAGUUAUCAUCCAAUAAGAA   187

2.0 Sequence 8570 from Patent EP2985353 NA coding protein psRNATarget
JB170906.1
ncRNA:24   CACUGGCAGUAGUAGGUUAUUCUU   1
  |*|=|*||=|||||||||||||||
targets:164   GCGGCAGUUAUCAUCCAAUAAGAA   187

2.0 Sequence 8570 from Patent EP2559767 NA coding protein psRNATarget