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BaseInfo

ncRNA ID novel_gma_miR6105
Species Glycine max
Class miRNA
Genome position Chr12:10020473-10020524 [+]
Reference genome Glycine_max_v2.0
Source SRR1295518;SRR1451609;SRR1451616
Length 23
Mature sequence(if miRNA) 30 - AAGACAAGUAGUUUUGACCGAGA - 52
Stem-loop(if miRNA) --   AC            A  -  U
  UUG  CGAGACUAUUUG CU GU U
  |||  |||||||||||| || || G
  AGC  GUUUUGAUGAAC GA CA U
AG   CA            A  A  U
Stem-loop sequence UUGACCGAGACUAUUUGACUGUUUGUUACAAGACAAGUAGUUUUGACCGAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775525.1
ncRNA:23   AGAGCCAGUUUUGAUGAACAGAA   1
  ||*||||||||||||||||||||
targets:1609   UCCCGGUCAAAACUACUUGUCUU   1631

0.0 PREDICTED: Glycine max uncharacterized LOC106798717 (LOC106798717), mRNA uncharacterized LOC106798717(LOC106798717) coding protein psRNATarget
XM_014775524.1
ncRNA:23   AGAGCCAGUUUUGAUGAACAGAA   1
  ||*||||||||||||||||||||
targets:1029   UCCCGGUCAAAACUACUUGUCUU   1051

0.0 PREDICTED: Glycine max myb-related protein 315-like (LOC100777804), mRNA myb-related protein 315-like(LOC100777804) coding protein psRNATarget