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BaseInfo

ncRNA ID novel_gma_miR6104
Species Glycine max
Class miRNA
Genome position Chr1:29082351-29082402 [+]
Reference genome Glycine_max_v2.0
Source SRR835771
Length 24
Mature sequence(if miRNA) 1 - UUCAACAUUCUAAGACGGUCUUUG - 24
Stem-loop(if miRNA) -UUC   -              UUUG
    AAC AUUCUAAGACGGUC    A
    ||| ||||||||||||||
    UUG UAAGAUUCUGCCAG    C
ACGA   C              UGCA
Stem-loop sequence UUCAACAUUCUAAGACGGUCUUUGACACGUGACCGUCUUAGAAUCGUUAGCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014767461.1
ncRNA:24   GUUUCUGGCAGAAUCUUACAACUU   1
  =|||*|||||||||||||||||*|
targets:2612   UAAAAACCGUCUUAGAAUGUUGUA   2635

1.5 PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA putative dual specificity protein phosphatase DSP8(LOC100787468) coding protein psRNATarget
XM_003532913.3
ncRNA:24   GUUUCUGGCAGAAUCUUACAACUU   1
  ||=|*|||||*|*|||||||||||
targets:107   CAGAAACCGUAUGAGAAUGUUGAA   130

2.5 PREDICTED: Glycine max putative pumilio homolog 7, chloroplastic (LOC100780898), mRNA putative pumilio homolog 7, chloroplastic(LOC100780898) coding protein psRNATarget