| ncRNA ID | novel_gma_miR6089 |
| Species | Glycine max |
| Class | miRNA |
| Genome position | Chr12:8798091-8798250 [+] |
| Reference genome | Glycine_max_v2.0 |
| Source | SRR835771 |
| Length | 24 |
| Mature sequence(if miRNA) | 137 - AGGACACAAAAAGUAAAUUAUCAU - 160 |
| Stem-loop(if miRNA) |
-- - - G - ---------- UUAAAAUUUUA --- A A AAU AAU GA AGUUU CUUU UUGU UCCU AGGUAUC GUUUU UGUG UU UUUUUACA AUCAU G || ||||| |||| |||| |||| ||||||| ||||| |||| || |||||||| ||||| A CU UUAAA GAAA AACA AGGA UCCGUAG CAAAA AUAU AA AAAAAUGU UAGUA U UA A U - C UUUGGACGUU UUAAACUUUUA UAA A A GGU CAU |
| Stem-loop sequence | GAAGUUUCUUUGUUGUUCCUAGGUAUCUUAAAAUUUUAGUUUUUGUGAUUAUUUUUACAAAUAUCAUAAUGAUUACAUGAUUGGUGUAAAAAAAAAUAUAAAUAAAACAUUUUCAAAUUGAUGCCUUUGCAGGUUUAGGACACAAAAAGUAAAUUAUCAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_003517234.3 |
|
3.0 | PREDICTED: Glycine max upstream activation factor subunit spp27-like (LOC100784838), transcript variant X2, mRNA | upstream activation factor subunit spp27-like(LOC100784838) | coding protein | psRNATarget | |||||||||
| XM_014776095.1 |
|
3.0 | PREDICTED: Glycine max upstream activation factor subunit spp27-like (LOC100784838), transcript variant X1, mRNA | upstream activation factor subunit spp27-like(LOC100784838) | coding protein | psRNATarget |