ncRNA ID | novel_gma_miR6076 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr9:27728608-27728769 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835771 |
Length | 22 |
Mature sequence(if miRNA) | 141 - CUAAGCACAUGGUUACACCAAU - 162 |
Stem-loop(if miRNA) |
--   A      GGU     -  A      -----------     U  UAUU          -UGAAAC      ---G  A   AA  U   CUA GCACAU   UACAC CA UGAGCA           CUGCU GU    UAGAUAAAGA       CGGUCA    UC AUA  UG U   ||| ||||||   ||||| || ||||||           ||||| ||    ||||||||||       ||||||    || |||  || A   GAU CGUGUG   AUGUG GU AUUUGU           GACGA CG    AUUUAUUUCU       GCUAGU    AG UGU  AC A UA   -      --U     U  G      AAUAUAGUCCA     U  -UCU          UCCCUAA      AUGG  C   -A  G |
Stem-loop sequence | CUAAGCACAUGGUUACACCAAUGAGCACUGCUUGUUAUUUAGAUAAAGAUGAAACCGGUCAGUCAAUAAAUGUUAAGCAAUGUCGAGGUAUGAUCGAAUCCCUUCUUUAUUUAUCUGCUAGCAGACCUGAUAUAAUGUUUAGUGUGUGUAUGUGUGCUAGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006583076.2 |
|
3.0 | PREDICTED: Glycine max stress response protein NST1-like (LOC100796971), transcript variant X1, mRNA | stress response protein NST1-like(LOC100796971) | coding protein | psRNATarget | |||||||||
XM_014777686.1 |
|
3.0 | PREDICTED: Glycine max stress response protein NST1-like (LOC100796971), transcript variant X2, mRNA | stress response protein NST1-like(LOC100796971) | coding protein | psRNATarget |