ncRNA ID | novel_gma_miR6075 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr8:6833429-6833515 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835771;SRR1451612;SRR1451615 |
Length | 22 |
Mature sequence(if miRNA) | 66 - CAAGAAAAUGAAUGGUGAGGAU - 87 |
Stem-loop(if miRNA) |
-C  -        U       A    C   ----- A      AUU   CC CACCAUUC UUUUCUU AAAU UAA     C GAUAAG   A   || |||||||| ||||||| |||| |||     | ||||||   GG GUGGUAAG AAAAGAA UUUA AUU     G UUAUUC   G UA  A        U       C    A   ACUAA A      AGG |
Stem-loop sequence | CCCCACCAUUCUUUUUCUUAAAAUCUAACAGAUAAGAUUAGGGACUUAUUAGAAUCAUUAAAUUUCAAGAAAAUGAAUGGUGAGGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003520509.3 |
|
2.0 | PREDICTED: Glycine max isoamylase 2, chloroplastic-like (LOC100797949), mRNA | isoamylase 2, chloroplastic-like(LOC100797949) | coding protein | psRNATarget | |||||||||
BT090117.1 |
|
3.0 | Soybean clone JCVI-FLGm-3N9 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
NM_001251455.2 |
|
3.0 | Glycine max response regulator ARR6-like (LOC100306152), mRNA | uncharacterized LOC100306152(LOC100306152) | coding protein | psRNATarget |