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BaseInfo

ncRNA ID novel_gma_miR6045
Species Glycine max
Class miRNA
Genome position Chr2:35555521-35555663 [-]
Reference genome Glycine_max_v2.0
Source SRR835771
Length 24
Mature sequence(if miRNA) 1 - AAGGGUUGGACCUGAAUCAGGAGG - 24
Stem-loop(if miRNA) --    -       AA     G  --     ---G       -AU UG    A    UUUAAA   -  AG    A
  UCCU AUUUAGG  CCAAU UU  AAAUU    UAGCGCA   A  UUGU CGUG      ACA UG  UGUG G
  |||| |||||||  ||||| ||  |||||    |||||||   |  |||| ||||      ||| ||  ||||
  AGGA UAAGUCC  GGUUG GA  UUUAG    AUUGUGU   U  GACG GCAC      UGU AU  AUGC G
GG    C       -A     G  AU     UAAA       GUC GU    A    UUAAUA   U  GG    U
Stem-loop sequence UCCUAUUUAGGAACCAAUGUUAAAUUGUAGCGCAAUAUGUUGUACGUGUUUAAAACAUGAGUGUGAGGUCGUAGGUAUUGUAUAAUUCACGAGCAGUGUCUGUGUGUUAAAAUGAUUUUAAGGGUUGGACCUGAAUCAGGAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003545083.3
ncRNA:24   GGAGGACUAAGUCCAGGUUGGGAA   1
  =|*||||=|||||||=||||||||
targets:103   UCACCUGGUUCAGGUUCAACCCUU   126

2.5 PREDICTED: Glycine max uncharacterized LOC100797499 (LOC100797499), mRNA uncharacterized LOC100797499(LOC100797499) coding protein psRNATarget