ncRNA ID | novel_gma_miR6045 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:35555521-35555663 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835771 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGGGUUGGACCUGAAUCAGGAGG - 24 |
Stem-loop(if miRNA) |
--    -       AA     G  --     ---G       -AU UG    A    UUUAAA   -  AG    A   UCCU AUUUAGG  CCAAU UU  AAAUU    UAGCGCA   A  UUGU CGUG      ACA UG  UGUG G   |||| |||||||  ||||| ||  |||||    |||||||   |  |||| ||||      ||| ||  ||||   AGGA UAAGUCC  GGUUG GA  UUUAG    AUUGUGU   U  GACG GCAC      UGU AU  AUGC G GG    C       -A     G  AU     UAAA       GUC GU    A    UUAAUA   U  GG    U |
Stem-loop sequence | UCCUAUUUAGGAACCAAUGUUAAAUUGUAGCGCAAUAUGUUGUACGUGUUUAAAACAUGAGUGUGAGGUCGUAGGUAUUGUAUAAUUCACGAGCAGUGUCUGUGUGUUAAAAUGAUUUUAAGGGUUGGACCUGAAUCAGGAGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003545083.3 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100797499 (LOC100797499), mRNA | uncharacterized LOC100797499(LOC100797499) | coding protein | psRNATarget |