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BaseInfo

ncRNA ID	novel_gma_miR6042
Species	Glycine max
Class	miRNA
Genome position	Chr1:35848295-35848360 [-]
Reference genome	Glycine_max_v2.0
Source	SRR835771
Length	24
Mature sequence(if miRNA)	43 - UAGGAUUUUUUAGGUCGACGUUGG - 66
Stem-loop(if miRNA)	---U   A      AG  C            AAA     AGG UUUUUU  GU GACGUUGGCUAA   U     ||| ||||||  || ||||||||||||     UCC GAAAAG  UA CUGUAACUGGUU   A CGAU   A      CU  -            CCG
Stem-loop sequence	UAGGAUUUUUUAGGUCGACGUUGGCUAAAAAUAGCCUUGGUCAAUGUCAUUCGAAAAGACCUUAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK285179.1	ncRNA:24   GGUUGCAGCUGGAUUUUUUAGGAU   1   *=||*||=||=||||||||||||= targets:1041   AUAAAGUUGAUCUAAAAAAUCCUG   1064 Target Full Sequence	3.0	Glycine max cDNA, clone: GMFL01-03-M04	NA	coding protein	psRNATarget
NM_001255318.2	ncRNA:24   GGUUGCAGCUGGAUUUUUUAGGAU   1   *=||*||=||=||||||||||||= targets:1061   AUAAAGUUGAUCUAAAAAAUCCUG   1084 Target Full Sequence	3.0	Glycine max uncharacterized LOC100812892 (LOC100812892), mRNA	uncharacterized LOC100812892(LOC100812892)	coding protein	psRNATarget
BT098836.1	ncRNA:24   GGUUGCAGCUGGAUUUUUUAGGAU   1   *=||*||=||=||||||||||||= targets:1063   AUAAAGUUGAUCUAAAAAAUCCUG   1086 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-23M8 unknown mRNA	NA	coding protein	psRNATarget
AK244291.1	ncRNA:24   GGUUGCAGCUGGAUUUUUUAGGAU   1   =|==-||=|=*||||||||||||| targets:1906   UCGG-GUUGGACUAAAAAAUCCUA   1928 Target Full Sequence	3.0	Glycine max cDNA, clone: GMFL01-02-J19	NA	coding protein	psRNATarget
XM_003526881.3	ncRNA:24   GGUUGCAGCUGGAUUUUUUAGGAU   1   =|==-||=|=*||||||||||||| targets:2022   UCGG-GUUGGACUAAAAAAUCCUA   2044 Target Full Sequence	3.0	PREDICTED: Glycine max chaperone protein ClpC, chloroplastic (LOC100804035), transcript variant X2, mRNA	chaperone protein ClpC, chloroplastic(LOC100804035)	coding protein	psRNATarget
XM_006581781.2	ncRNA:24   GGUUGCAGCUGGAUUUUUUAGGAU   1   =|==-||=|=*||||||||||||| targets:2054   UCGG-GUUGGACUAAAAAAUCCUA   2076 Target Full Sequence	3.0	PREDICTED: Glycine max chaperone protein ClpC, chloroplastic (LOC100804035), transcript variant X1, mRNA	chaperone protein ClpC, chloroplastic(LOC100804035)	coding protein	psRNATarget