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BaseInfo

ncRNA ID novel_gma_miR6039
Species Glycine max
Class miRNA
Genome position Chr20:45907281-45907379 [+]
Reference genome Glycine_max_v2.0
Source SRR835771
Length 24
Mature sequence(if miRNA) 76 - GUAUGAUUCAUACGGAUUGUCAAU - 99
Stem-loop(if miRNA) --UA       C     GC                 UA         UA
    GCAAUCC UAUGA  CAUAUGGAUUGUUGAUC  UAUGGUUCA  C
    ||||||| |||||  |||||||||||||||||  |||||||||  G
    UGUUAGG AUACU  GUAUGCCUAACGAUUAG  AUAUCAAGU  G
UAAC       C     UA                 GC         UA
Stem-loop sequence UAGCAAUCCCUAUGAGCCAUAUGGAUUGUUGAUCUAUAUGGUUCAUACGGAUUGAACUAUACGGAUUAGCAAUCCGUAUGAUUCAUACGGAUUGUCAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006600031.2
ncRNA:24   UAACUGUUAGGCAUACUUAGUAUG   1
  *|||-||*||||*|||||||||||
targets:478   UUUG-CACUCCGAAUGAAUCAUAC   500

2.5 PREDICTED: Glycine max 13-hydroxylupanine O-tigloyltransferase-like (LOC100797901), mRNA 13-hydroxylupanine O-tigloyltransferase-like(LOC100797901) coding protein psRNATarget
XM_003549087.2
ncRNA:24   UAACUGUUAGGCAUACUUAGUAUG   1
  *|||-||*||||*|||||||||||
targets:506   UUUG-CACUCCGAAUGAAUCAUAC   528

2.5 PREDICTED: Glycine max 13-hydroxylupanine O-tigloyltransferase-like (LOC100795237), mRNA 13-hydroxylupanine O-tigloyltransferase-like(LOC100795237) coding protein psRNATarget