ncRNA ID | novel_gma_miR6039 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:45907281-45907379 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835771 |
Length | 24 |
Mature sequence(if miRNA) | 76 - GUAUGAUUCAUACGGAUUGUCAAU - 99 |
Stem-loop(if miRNA) |
--UA       C     GC                 UA         UA     GCAAUCC UAUGA  CAUAUGGAUUGUUGAUC  UAUGGUUCA  C     ||||||| |||||  |||||||||||||||||  |||||||||  G     UGUUAGG AUACU  GUAUGCCUAACGAUUAG  AUAUCAAGU  G UAAC       C     UA                 GC         UA |
Stem-loop sequence | UAGCAAUCCCUAUGAGCCAUAUGGAUUGUUGAUCUAUAUGGUUCAUACGGAUUGAACUAUACGGAUUAGCAAUCCGUAUGAUUCAUACGGAUUGUCAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006600031.2 |
|
2.5 | PREDICTED: Glycine max 13-hydroxylupanine O-tigloyltransferase-like (LOC100797901), mRNA | 13-hydroxylupanine O-tigloyltransferase-like(LOC100797901) | coding protein | psRNATarget | |||||||||
XM_003549087.2 |
|
2.5 | PREDICTED: Glycine max 13-hydroxylupanine O-tigloyltransferase-like (LOC100795237), mRNA | 13-hydroxylupanine O-tigloyltransferase-like(LOC100795237) | coding protein | psRNATarget |