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BaseInfo

ncRNA ID novel_gma_miR6034
Species Glycine max
Class miRNA
Genome position Chr12:6738320-6738415 [-]
Reference genome Glycine_max_v2.0
Source SRR835770
Length 21
Mature sequence(if miRNA) 76 - CACAUCAUCAUGCCUUGUCAC - 96
Stem-loop(if miRNA) --    U      G        CA                  C   GA
  CACA CAUCAU CCUUGUCA  GACACUUCAUUGUCACGU AUU  G
  |||| |||||| ||||||||  |||||||||||||||||| |||
  GUGU GUAGUG GGAACGGU  CUGUGGAGUAACAGUGCA UAG  G
CA    U      G        AC                  A   UG
Stem-loop sequence CACAUCAUCAUGCCUUGUCACAGACACUUCAUUGUCACGUCAUUGAGGGUGAUAACGUGACAAUGAGGUGUCCAUGGCAAGGGGUGAUGUUGUGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014763831.1
ncRNA:21   CACUGUUCCGUACUACUACAC   1
  |||||||||=||||||||||*
targets:1451   GUGACAAGGUAUGAUGAUGUC   1471

2.5 PREDICTED: Glycine max uncharacterized LOC100799189 (LOC100799189), transcript variant X6, mRNA uncharacterized LOC100799189(LOC100799189) coding protein psRNATarget
XM_006590571.2
ncRNA:21   CACUGUUCCGUACUACUACAC   1
  |||||||||=||||||||||*
targets:1501   GUGACAAGGUAUGAUGAUGUC   1521

2.5 PREDICTED: Glycine max uncharacterized LOC100799189 (LOC100799189), transcript variant X4, mRNA uncharacterized LOC100799189(LOC100799189) coding protein psRNATarget
XM_014763830.1
ncRNA:21   CACUGUUCCGUACUACUACAC   1
  |||||||||=||||||||||*
targets:1583   GUGACAAGGUAUGAUGAUGUC   1603

2.5 PREDICTED: Glycine max uncharacterized LOC100799189 (LOC100799189), transcript variant X5, mRNA uncharacterized LOC100799189(LOC100799189) coding protein psRNATarget
XM_003538744.3
ncRNA:21   CACUGUUCCGUACUACUACAC   1
  |||||||||=||||||||||*
targets:1617   GUGACAAGGUAUGAUGAUGUC   1637

2.5 PREDICTED: Glycine max uncharacterized LOC100799189 (LOC100799189), transcript variant X3, mRNA uncharacterized LOC100799189(LOC100799189) coding protein psRNATarget
XM_006590569.2
ncRNA:21   CACUGUUCCGUACUACUACAC   1
  |||||||||=||||||||||*
targets:1633   GUGACAAGGUAUGAUGAUGUC   1653

2.5 PREDICTED: Glycine max uncharacterized LOC100799189 (LOC100799189), transcript variant X1, mRNA uncharacterized LOC100799189(LOC100799189) coding protein psRNATarget
XM_006590570.2
ncRNA:21   CACUGUUCCGUACUACUACAC   1
  |||||||||=||||||||||*
targets:1768   GUGACAAGGUAUGAUGAUGUC   1788

2.5 PREDICTED: Glycine max uncharacterized LOC100799189 (LOC100799189), transcript variant X2, mRNA uncharacterized LOC100799189(LOC100799189) coding protein psRNATarget