ncRNA ID | novel_gma_miR6031 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:43080765-43080869 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835770 |
Length | 22 |
Mature sequence(if miRNA) | 84 - UCAACUUGAUCCGUAAGACUUU - 105 |
Stem-loop(if miRNA) |
--                  CUUU         UGUUGAUCAGU   -GU       A   UCAACUUGAUCCGUAAGA    UACAGAUCA           AUU   UCCGUAA A   ||||||||||||||||||    |||||||||           |||   ||||||| A   AGUUGAACUAGGCAUUCU    AUGUUUAGU           UGA   AGGCAUU G CU                  AACU         -----------   AAU       C |
Stem-loop sequence | UCAACUUGAUCCGUAAGACUUUUACAGAUCAUGUUGAUCAGUAUUGUUCCGUAAAAAGCUUACGGAUAAAGUUGAUUUGUAUCAAUCUUACGGAUCAAGUUGAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014768353.1 |
|
2.0 | PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA | CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) | coding protein | psRNATarget | |||||||||
XM_006600975.2 |
|
2.5 | PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA | basic leucine zipper 9-like(LOC100776831) | coding protein | psRNATarget |