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BaseInfo

ncRNA ID novel_gma_miR6023
Species Glycine max
Class miRNA
Genome position Chr2:32230638-32230859 [+]
Reference genome Glycine_max_v2.0
Source SRR835770;SRR835773
Length 24
Mature sequence(if miRNA) 1 - UGGAACAAAUAGUAGAUAUAGAAU - 24
Stem-loop(if miRNA) --U                    A          A                                                     C             GUAAAC   UU
   GGAACAAAUAGUAGAUAUAG AUCUAAUAUU ACAUUGGAUCAAAUUCUAGGAUAGAUUCUCUUAAUCCUAGACAAUUAUACAAC UAAACUGGUUUGU      UAG  C
   |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||      |||
   CCUUGUUUAUCAUCUAUGUU UAGAUUAUAA UGUAACCUAGUUUAAGAUCCUAUCUAAGAGAGUUAGGAUCUGUUAAUAUGUUG AUUUGACCAAACG      GUC  U
UGC                    A          C                                                     A             ----AA   UA
Stem-loop sequence UGGAACAAAUAGUAGAUAUAGAAUCUAAUAUUAACAUUGGAUCAAAUUCUAGGAUAGAUUCUCUUAAUCCUAGACAAUUAUACAACCUAAACUGGUUUGUGUAAACUAGUUCUAUCUGAAGCAAACCAGUUUAAGUUGUAUAAUUGUCUAGGAUUGAGAGAAUCUAUCCUAGAAUUUGAUCCAAUGUCAAUAUUAGAUAUUGUAUCUACUAUUUGUUCCCGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003536455.3
ncRNA:24   UAAG---AUAUAGAUGAUAAACAAGGU   1
  *|||---|||*|||=||||||||||||
targets:4607   CUUCACUUAUUUCUGCUAUUUGUUCCA   4633

2.5 PREDICTED: Glycine max protein GFS12-like (LOC100809116), mRNA protein GFS12-like(LOC100809116) coding protein psRNATarget