ncRNA ID | novel_gma_miR6022 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:14144842-14144938 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295518 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAACCCGUUGUAGAAUGCUUGAAU - 24 |
Stem-loop(if miRNA) |
--   U               AUC    AUC    C      A   AAC   UCA AGCAUUUUACGACGG   UUAC   AAAA CGUCUU GAA   U   ||| |||||||||||||||   ||||   |||| |||||| |||   AGU UCGUAAGAUGUUGCC   AGUG   UUUU GUAGAA CUU   A UA   -               CAA    GCA    U      A   AGC |
Stem-loop sequence | UCAUAGCAUUUUACGACGGAUCUUACAUCAAAACCGUCUUAGAAAACUACGAUUCAAAGAUGUUUUUACGGUGAAACCCGUUGUAGAAUGCUUGAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003546620.3 |
|
3.0 | PREDICTED: Glycine max transcription factor bHLH82-like (LOC100806899), mRNA | transcription factor bHLH82-like(LOC100806899) | coding protein | psRNATarget | |||||||||
XM_003533839.3 |
|
3.0 | PREDICTED: Glycine max transcription factor bHLH66-like (LOC100807286), mRNA | transcription factor bHLH66-like(LOC100807286) | coding protein | psRNATarget |