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BaseInfo

ncRNA ID novel_gma_miR6022
Species Glycine max
Class miRNA
Genome position Chr11:14144842-14144938 [-]
Reference genome Glycine_max_v2.0
Source SRR1295518
Length 24
Mature sequence(if miRNA) 1 - AAACCCGUUGUAGAAUGCUUGAAU - 24
Stem-loop(if miRNA) --   U               AUC    AUC    C      A   AAC
  UCA AGCAUUUUACGACGG   UUAC   AAAA CGUCUU GAA   U
  ||| |||||||||||||||   ||||   |||| |||||| |||
  AGU UCGUAAGAUGUUGCC   AGUG   UUUU GUAGAA CUU   A
UA   -               CAA    GCA    U      A   AGC
Stem-loop sequence UCAUAGCAUUUUACGACGGAUCUUACAUCAAAACCGUCUUAGAAAACUACGAUUCAAAGAUGUUUUUACGGUGAAACCCGUUGUAGAAUGCUUGAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003546620.3
ncRNA:24   UAAGUUCGUAAGAUGUUGCCCAAA   1
  =|*|||*|*||||||||||||||*
targets:791   GUCCAAACUUUCUACAACGGGUUC   814

3.0 PREDICTED: Glycine max transcription factor bHLH82-like (LOC100806899), mRNA transcription factor bHLH82-like(LOC100806899) coding protein psRNATarget
XM_003533839.3
ncRNA:24   UAAGUUCGUAAGAUGUUGCCCAAA   1
  =|*|||||**|||||||||||||*
targets:874   GUCCAAGCUCUCUACAACGGGUUC   897

3.0 PREDICTED: Glycine max transcription factor bHLH66-like (LOC100807286), mRNA transcription factor bHLH66-like(LOC100807286) coding protein psRNATarget