ncRNA ID | novel_gma_miR6019 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:51943878-51943973 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295518 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAAUGCGUUUGGAUAGAGAAUUU - 24 |
Stem-loop(if miRNA) |
-    U     UG     A         -----   AGGAAAGAAAUUUA  AGAA GCGUU  GAUAG GAAUUUUAA     CUG              U  |||| |||||  ||||| |||||||||     |||  UUUU CGUAG  UUGUU CUUAAGAUU     UUU              C A    U     GU     A         UAAUG   UUAAGUUUAAGAGA |
Stem-loop sequence | AGAAUGCGUUUGGAUAGAGAAUUUUAACUGAGGAAAGAAAUUUAUCAGAGAAUUUGAAUUUUUGUAAUUUAGAAUUCAUUGUUUGGAUGCUUUUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK287089.1 |
|
1.5 | Glycine max cDNA, clone: GMFL01-43-O04 | NA | coding protein | psRNATarget | |||||||||
XM_003544879.3 |
|
1.5 | PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 11 (LOC100815088), mRNA | CBL-interacting serine/threonine-protein kinase 11(LOC100815088) | coding protein | psRNATarget | |||||||||
BT099387.1 |
|
2.5 | Soybean clone JCVI-FLGm-23J16 unknown mRNA | NA | coding protein | psRNATarget |