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BaseInfo

ncRNA ID	novel_gma_miR6018
Species	Glycine max
Class	miRNA
Genome position	Chr17:23508327-23508431 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1292925
Length	24
Mature sequence(if miRNA)	82 - AAUAACCGUCUUUGAAUGUCGACC - 105
Stem-loop(if miRNA)	--GUA   A                                  A   GGAAC      ACA UCAAAGACGGUUAUUAUGUAAUAACCGUCUUUGA UGU     C      ||| |||||||||||||||||||||||||||||||||| |||     A      UGU AGUUUCUGCCAAUAAUGUAUUAUUGGUAGAAACU ACA     G CCAGC   A                                  A   AUGUA
Stem-loop sequence	GUAACAAUCAAAGACGGUUAUUAUGUAAUAACCGUCUUUGAAUGUGGAACCAGAUGUAACAAUCAAAGAUGGUUAUUAUGUAAUAACCGUCUUUGAAUGUCGACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014775607.1	ncRNA:24   CCAGCUGUAAGUUUCUGCCAAUAA   1   ***|*||||||||||||||||||| targets:1538   AAGCAACAUUCAAAGACGGUUAUU   1561 Target Full Sequence	0.0	PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA	protein MOR1(LOC102659664)	coding protein	psRNATarget
XM_014775607.1	ncRNA:24   CCAGCUGUAAGUUUCUGCCAAUAA   1   ***=*||||||||||||||||||| targets:1483   ACAUAACAUUCAAAGACGGUUAUU   1506 Target Full Sequence	0.0	PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA	protein MOR1(LOC102659664)	coding protein	psRNATarget
XM_014775607.1	ncRNA:24   CCAGCUGUAAGUUUCUGCCAAUAA   1   ***=*||||||||||=|||||||| targets:1593   ACAUAACAUUCAAAGGCGGUUAUU   1616 Target Full Sequence	1.5	PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA	protein MOR1(LOC102659664)	coding protein	psRNATarget
XM_014773514.1	ncRNA:24   CCAGCUGUAAGUUUCUGCCAAUAA   1   |****||||||*|||||||||||| targets:263   GACACACAUUCUAAGACGGUUAUU   286 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC106798042 (LOC106798042), transcript variant X1, mRNA	uncharacterized LOC106798042(LOC106798042)	coding protein	psRNATarget
XM_014775607.1	ncRNA:24   CCAGCUGUAAGUUUCUGCCAAUAA   1   ***=*=|||||||||=|||||||| targets:1648   ACAUAGCAUUCAAAGGCGGUUAUU   1671 Target Full Sequence	2.5	PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA	protein MOR1(LOC102659664)	coding protein	psRNATarget
XM_006599236.2	ncRNA:24   CCAGCUGUAAGUUUCUGCCAAUAA   1   **|**|||||=*|||||||||||| targets:474   CAUACACAUUUUAAGACGGUUAUU   497 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100788736 (LOC100788736), transcript variant X1, mRNA	uncharacterized LOC100788736(LOC100788736)	coding protein	psRNATarget
XM_014766219.1	ncRNA:24   CCAGCUGUAAGUUUCUGCCAAUAA   1   ****|||*||||||||||*||||| targets:993   AAAAGACUUUCAAAGACGAUUAUU   1016 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106795621 (LOC106795621), mRNA	uncharacterized LOC106795621(LOC106795621)	coding protein	psRNATarget