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BaseInfo

ncRNA ID novel_gma_miR6017
Species Glycine max
Class miRNA
Genome position Chr16:11393928-11394008 [+]
Reference genome Glycine_max_v2.0
Source SRR835770;SRR835773
Length 21
Mature sequence(if miRNA) 61 - AAAUCAUUGCAUAUAAUUUUU - 81
Stem-loop(if miRNA) --                       A  -        CG  
  AAAUUAUAUGCAAUGAUUUUUUU GC AAGAAAAU  UAG
  ||||||||||||||||||||||| || ||||||||  ||C
  UUUAAUAUACGUUACUAAAAAAA CG UUUUUUUA  AUA
UU                       -  A        AU  
Stem-loop sequence AAAUUAUAUGCAAUGAUUUUUUUAGCAAGAAAAUCGUAGCAUAUAAUUUUUUUAGCAAAAAAAUCAUUGCAUAUAAUUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003532937.3
ncRNA:21   UUUUUAAUAUACGUUACUAAA   1
  =||||||*||||||||*||||
targets:3170   GAAAAUUUUAUGCAAUUAUUU   3190

2.5 PREDICTED: Glycine max importin-4-like (LOC100795772), transcript variant X1, mRNA importin-4-like(LOC100795772) coding protein psRNATarget
XM_006605356.2
ncRNA:21   UUUUUAAUAUACGUUACUAAA   1
  ***|||||||*||||||||||
targets:8499   UCCAAUUAUAAGCAAUGAUUU   8519

2.5 PREDICTED: Glycine max sacsin-like (LOC100818243), mRNA sacsin-like(LOC100818243) coding protein psRNATarget
XM_003533641.3
ncRNA:21   UUUUUAAUAUACGUUACUAAA   1
  ***|||||||*||||||||||
targets:8492   UCCAAUUAUAAGCAAUGAUUU   8512

2.5 PREDICTED: Glycine max sacsin-like (LOC100789980), mRNA sacsin-like(LOC100789980) coding protein psRNATarget