ncRNA ID | novel_gma_miR6017 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr16:11393928-11394008 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835770;SRR835773 |
Length | 21 |
Mature sequence(if miRNA) | 61 - AAAUCAUUGCAUAUAAUUUUU - 81 |
Stem-loop(if miRNA) |
--                       A  -        CG     AAAUUAUAUGCAAUGAUUUUUUU GC AAGAAAAU  UAG   ||||||||||||||||||||||| || ||||||||  ||C   UUUAAUAUACGUUACUAAAAAAA CG UUUUUUUA  AUA UU                       -  A        AU   |
Stem-loop sequence | AAAUUAUAUGCAAUGAUUUUUUUAGCAAGAAAAUCGUAGCAUAUAAUUUUUUUAGCAAAAAAAUCAUUGCAUAUAAUUUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003532937.3 |
|
2.5 | PREDICTED: Glycine max importin-4-like (LOC100795772), transcript variant X1, mRNA | importin-4-like(LOC100795772) | coding protein | psRNATarget | |||||||||
XM_006605356.2 |
|
2.5 | PREDICTED: Glycine max sacsin-like (LOC100818243), mRNA | sacsin-like(LOC100818243) | coding protein | psRNATarget | |||||||||
XM_003533641.3 |
|
2.5 | PREDICTED: Glycine max sacsin-like (LOC100789980), mRNA | sacsin-like(LOC100789980) | coding protein | psRNATarget |