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BaseInfo

ncRNA ID novel_gma_miR6009
Species Glycine max
Class miRNA
Genome position Chr14:2761921-2762020 [-]
Reference genome Glycine_max_v2.0
Source SRR835770
Length 21
Mature sequence(if miRNA) 1 - UGGUUUUAAAAGUUGGGGACU - 21
Stem-loop(if miRNA) --                           UG CUCUA   -  UUUUAAAUA
  UUCCCAACUUUUAAAACCAUAAGUUUU  U     UAU UU         C
  |||||||||||||||||||||||||||  |     ||| ||         C
  AGGGGUUGAAAAUUUUGGUAUUCAAAA  A     GGG UU         C
UC                           GU ----A   A  GAUUUCAAA
Stem-loop sequence UUCCCAACUUUUAAAACCAUAAGUUUUUGUCUCUAUAUUUUUUUAAAUACCCAAACUUUAGUUAGGGAAUGAAAACUUAUGGUUUUAAAAGUUGGGGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003555770.3
ncRNA:21   UCAGGGGUUGAAAAUUUUGGU   1
  ||||||=||||||||||||||
targets:1369   AGUCCCUAACUUUUAAAACCA   1389

1.0 PREDICTED: Glycine max probable xyloglucan endotransglucosylase/hydrolase protein 28 (LOC100817874), mRNA probable xyloglucan endotransglucosylase/hydrolase protein 28(LOC100817874) coding protein psRNATarget