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BaseInfo

ncRNA ID	novel_gma_miR6007
Species	Glycine max
Class	miRNA
Genome position	Chr14:47829451-47829530 [-]
Reference genome	Glycine_max_v2.0
Source	SRR835770
Length	24
Mature sequence(if miRNA)	1 - GUUUAUAUAUCUGUUGGACAAUUU - 24
Stem-loop(if miRNA)	--U     G         -    --AA      CAUCGU       UUGUU AAUAGAUGU UAGG    GUCUCA      CUAC    ||||| ||||||||| ||||    ||||||      |||C    AACAG UUGUCUAUA AUUU    UAGGGU      GAUU UUU     G         U    GACG      --UCUU
Stem-loop sequence	UUUGUUGAAUAGAUGUUAGGAAGUCUCACAUCGUCUACCUUAGUUCUUGGGAUGCAGUUUAUAUAUCUGUUGGACAAUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT094066.1	ncRNA:24   UUUAACAGGUUGUCUAUAUAUUUG   1   ||=|||||||||||||||||||=| targets:171   AAGUUGUCCAACAGAUAUAUAAGC   194 Target Full Sequence	1.5	Soybean clone JCVI-FLGm-24J13 unknown mRNA	NA	coding protein	psRNATarget
XM_014764503.1	ncRNA:24   UUUAACAGGUUGUCUAUAUAUUUG   1   ||=|||||||||||||||||||== targets:3800   AAGUUGUCCAACAGAUAUAUAAGU   3823 Target Full Sequence	2.5	PREDICTED: Glycine max probable serine/threonine-protein kinase GCN2 (LOC100797996), transcript variant X2, mRNA	probable serine/threonine-protein kinase GCN2(LOC100797996)	coding protein	psRNATarget
XM_006592086.2	ncRNA:24   UUUAACAGGUUGUCUAUAUAUUUG   1   ||=|||||||||||||||||||== targets:4164   AAGUUGUCCAACAGAUAUAUAAGU   4187 Target Full Sequence	2.5	PREDICTED: Glycine max probable serine/threonine-protein kinase GCN2 (LOC100797996), transcript variant X1, mRNA	probable serine/threonine-protein kinase GCN2(LOC100797996)	coding protein	psRNATarget
XM_014765942.1	ncRNA:24   UUUAACAGGUUGUCUAUAUAUUUG   1   |*||||*|==|||||||||||||| targets:288   ACAUUGCCUGACAGAUAUAUAAAC   311 Target Full Sequence	3.0	PREDICTED: Glycine max probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic (LOC100782297), mRNA	probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic(LOC100782297)	coding protein	psRNATarget
XM_003550621.3	ncRNA:24   UUUAACAGGUUGUCUAUAUAUUUG   1   |*||||*|==|||||||||||||| targets:2173   ACAUUGCCUGACAGAUAUAUAAAC   2196 Target Full Sequence	3.0	PREDICTED: Glycine max probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic (LOC100786607), mRNA	probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic(LOC100786607)	coding protein	psRNATarget