ncRNA ID | novel_gma_miR6006 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:5316725-5316874 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835770 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAAGUGAUGGUAUAACAGACGGAG - 24 |
Stem-loop(if miRNA) |
--          UA   C                C     ACCCAA   UUGACAUGUCAGUGCCACGUCAUUGAG   UAAGUGAUGG  UAA AGACGGAGUGUCACGU AUUAC      UCA                           G   ||||||||||  ||| |||||||||||||||| |||||      |||   AUUCAUUAUU  AUU UCUGUCUCACAGUGCA UAAUG      AUA                           G CA          GG   A                U     --CAAA   AUAUCUGUAGAGUAAUAGUACAGUAGU |
Stem-loop sequence | UAAGUGAUGGUAUAACAGACGGAGUGUCACGUCAUUACACCCAAUCAUUGACAUGUCAGUGCCACGUCAUUGAGGGUGAUGACAUGAUAAUGAGAUGUCUAUAAUAAAACGUAAUUACGUGACACUCUGUCUAUUAGGUUAUUACUUAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003555291.3 |
|
2.0 | PREDICTED: Glycine max primary amine oxidase-like (LOC100800090), mRNA | primary amine oxidase-like(LOC100800090) | coding protein | psRNATarget |