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BaseInfo

ncRNA ID novel_gma_miR6006
Species Glycine max
Class miRNA
Genome position Chr14:5316725-5316874 [+]
Reference genome Glycine_max_v2.0
Source SRR835770
Length 24
Mature sequence(if miRNA) 1 - UAAGUGAUGGUAUAACAGACGGAG - 24
Stem-loop(if miRNA) --          UA   C                C     ACCCAA   UUGACAUGUCAGUGCCACGUCAUUGAG
  UAAGUGAUGG  UAA AGACGGAGUGUCACGU AUUAC      UCA                           G
  ||||||||||  ||| |||||||||||||||| |||||      |||
  AUUCAUUAUU  AUU UCUGUCUCACAGUGCA UAAUG      AUA                           G
CA          GG   A                U     --CAAA   AUAUCUGUAGAGUAAUAGUACAGUAGU
Stem-loop sequence UAAGUGAUGGUAUAACAGACGGAGUGUCACGUCAUUACACCCAAUCAUUGACAUGUCAGUGCCACGUCAUUGAGGGUGAUGACAUGAUAAUGAGAUGUCUAUAAUAAAACGUAAUUACGUGACACUCUGUCUAUUAGGUUAUUACUUAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003555291.3
ncRNA:24   GAGGCAGACAAUAUGGUAGUGAAU   1
  *|*=||*|*|||||||||||||||
targets:246   GUAUGUAUUUUAUACCAUCACUUA   269

2.0 PREDICTED: Glycine max primary amine oxidase-like (LOC100800090), mRNA primary amine oxidase-like(LOC100800090) coding protein psRNATarget