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BaseInfo

ncRNA ID	novel_gma_miR6004
Species	Glycine max
Class	miRNA
Genome position	Chr12:37310982-37311189 [-]
Reference genome	Glycine_max_v2.0
Source	SRR835768;SRR1451618
Length	21
Mature sequence(if miRNA)	1 - UCUUUUGAGUUUGACUAUUAA - 21
Stem-loop(if miRNA)	--                 A           C                              A           A      AA  G  C  C        AUCAA   AGUAGUCAAAUUCAAAA AUAAUGAAAAA UAUGUGUUAAACUUGUAAGAUGGUGACAUU UGAUGGUUAUG AUGUAA  AU AC UU UAUAUUGG     G   ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||  || || || ||||||||   UUAUCAGUUUGAGUUUU UAUUACUUUUU AUACAUAGUUUGAACGUUCUACUACUGUAA ACUAUCAAUAC UACAUU  UA UG AA AUGUAACC     U AA                 C           A                              C           C      --  G  A  A        AACAU
Stem-loop sequence	AGUAGUCAAAUUCAAAAAAUAAUGAAAAACUAUGUGUUAAACUUGUAAGAUGGUGACAUUAUGAUGGUUAUGAAUGUAAAAAUGACCUUCUAUAUUGGAUCAAGUUACAACCAAUGUAAAAAGUGAUUUACAUCCAUAACUAUCACAAUGUCAUCAUCUUGCAAGUUUGAUACAUAAUUUUUCAUUAUCUUUUGAGUUUGACUAUUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003517760.3	ncRNA:21   AAUUAUCAGUUUGAGUUUUCU   1   *|||||||||||=|||||||| targets:857   CUAAUAGUCAAAUUCAAAAGA   877 Target Full Sequence	1.5	PREDICTED: Glycine max transcription repressor MYB5-like (LOC100787150), mRNA	transcription repressor MYB5-like(LOC100787150)	coding protein	psRNATarget
BT094757.1	ncRNA:21   AAUUAUCAGUUUGAGUUUUCU   1   |*|||=||||||||||||||* targets:294   UGAAUGGUCAAACUCAAAAGU   314 Target Full Sequence	2.0	Soybean clone JCVI-FLGm-6I23 unknown mRNA	NA	coding protein	psRNATarget
XM_003520039.3	ncRNA:21   AAUUAUCAGUUUGAGUUUUCU   1   *||=|*||||||||||||||| targets:860   CUAGUUGUCAAACUCAAAAGA   880 Target Full Sequence	2.0	PREDICTED: Glycine max transcription factor MYB32-like (LOC100792464), mRNA	transcription factor MYB32-like(LOC100792464)	coding protein	psRNATarget
KX609993.1	ncRNA:21   AAUUAUCAGUUUGAGUUUUCU   1   *||=|*||||||||||||||| targets:1295   CUAGUUGUCAAACUCAAAAGA   1315 Target Full Sequence	2.0	UNVERIFIED: Glycine max clone Ldx004 mRNA sequence	NA	coding protein	psRNATarget