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BaseInfo

ncRNA ID novel_gma_miR6001
Species Glycine max
Class miRNA
Genome position Chr8:37904228-37904300 [-]
Reference genome Glycine_max_v2.0
Source SRR835768
Length 21
Mature sequence(if miRNA) 53 - CAGAGGUAUGCAUCUGUUUCA - 73
Stem-loop(if miRNA) --                                 U
  CAGAGGUAUGCAUCUGUUUCAGAAGGUUAUAUG U
  ||||||||||||||||||||||||||||||||| A
  GUCUCCAUACGUAGACAAAGUCUUCCAAUGUAU G
UU                                 U
Stem-loop sequence CAGAGGUAUGCAUCUGUUUCAGAAGGUUAUAUGUUAGUUAUGUAACCUUCUGAAACAGAUGCAUACCUCUGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003524716.3
ncRNA:21   ACUUUGUCUACGUAUGGAGAC   1
  ||||||||||*|||||||||*
targets:1705   UGAAACAGAUUCAUACCUCUC   1725

2.5 PREDICTED: Glycine max SEC1 family transport protein SLY1-like (LOC100818953), mRNA SEC1 family transport protein SLY1-like(LOC100818953) coding protein psRNATarget