ncRNA ID | novel_gma_miR6000 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr8:37904233-37904305 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835768 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CAGAGGUAUGCAUCUGUUUCA - 21 |
Stem-loop(if miRNA) |
--                             C  AA   CAGAGGUAUGCAUCUGUUUCAGAAGGUUA AU  C   ||||||||||||||||||||||||||||| ||  U   GUCUCCAUACGUAGACAAAGUCUUCCAAU UA  A UU                             A  CA |
Stem-loop sequence | CAGAGGUAUGCAUCUGUUUCAGAAGGUUACAUAACUAACAUAUAACCUUCUGAAACAGAUGCAUACCUCUGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003524716.3 |
|
2.5 | PREDICTED: Glycine max SEC1 family transport protein SLY1-like (LOC100818953), mRNA | SEC1 family transport protein SLY1-like(LOC100818953) | coding protein | psRNATarget |