Search result

BaseInfo

ncRNA ID	novel_gma_miR5998
Species	Glycine max
Class	miRNA
Genome position	Chr7:37106026-37106229 [-]
Reference genome	Glycine_max_v2.0
Source	SRR835768;SRR835772
Length	24
Mature sequence(if miRNA)	1 - UAUAGGGACUAAAUGGGUAAUUAA - 24
Stem-loop(if miRNA)	--                    --AAGU   AUAAGUGAAUUUUUUAGUCCCUGAAGUUUACAUUUUAAUUCCCAAAAGGUCUCUGCUGUUAAGUUAAAAUUU   AAUUACUCAUUUAGUCCCUG      UUA                                                                        U   ||||||||||||||||||||      |||   UUAAUGGGUAAAUCAGGGAU      GGU                                                                        U AA                    AUUAAA   UUGAUAUCAAUUUUUCACUUAAAAAAUCAGGGACUUCAAAUGUAAAAUUAAGGGUUUUCCGAGGAUGGUAAU
Stem-loop sequence	AAUUACUCAUUUAGUCCCUGAAGUUUAAUAAGUGAAUUUUUUAGUCCCUGAAGUUUACAUUUUAAUUCCCAAAAGGUCUCUGCUGUUAAGUUAAAAUUUUUUAAUGGUAGGAGCCUUUUGGGAAUUAAAAUGUAAACUUCAGGGACUAAAAAAUUCACUUUUUAACUAUAGUUUGGAAAUUAUAGGGACUAAAUGGGUAAUUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014773932.1	ncRNA:24   AAUUAAUGGGUAAAUCAGGGAUAU   1   *|**|||||=*||||||||||||| targets:1994   GUUCUUACCUUUUUAGUCCCUAUA   2017 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X2, mRNA	uncharacterized LOC100819268(LOC100819268)	coding protein	psRNATarget
XM_006577048.2	ncRNA:24   AAUUAAUGGGUAAAUCAGGGAUAU   1   *|**|||||=*||||||||||||| targets:1884   GUUCUUACCUUUUUAGUCCCUAUA   1907 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X1, mRNA	uncharacterized LOC100819268(LOC100819268)	coding protein	psRNATarget