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BaseInfo

ncRNA ID novel_gma_miR5996
Species Glycine max
Class miRNA
Genome position Chr11:29741509-29741605 [-]
Reference genome Glycine_max_v2.0
Source SRR835768
Length 21
Mature sequence(if miRNA) 1 - CAAAAUUGGAUGUGGGCAAGU - 21
Stem-loop(if miRNA) --      UG      AG       --UUG  U -  AUAUGAUUUAUACA
  UUGCCU  GUCUAA  UUUGCUU     GU U AA              U
  ||||||  ||||||  |||||||     || | ||
  AACGGG  UAGGUU  AAACGAG     CC U GG              G
UG      UG      -A       UUUAA  - A  AUGUUCAGGAUUUA
Stem-loop sequence UUGCCUUGGUCUAAAGUUUGCUUUUGGUUUAAAUAUGAUUUAUACAUGAUUUAGGACUUGUAGGAUCCAAUUUGAGCAAAAUUGGAUGUGGGCAAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT098210.1
ncRNA:21   UGAACGGGUGUAGGUUAAAAC   1
  *||||=*|||||||||||||*
targets:368   UCUUGUACACAUCCAAUUUUU   388

3.0 Soybean clone JCVI-FLGm-23A9 unknown mRNA NA coding protein psRNATarget