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BaseInfo

ncRNA ID novel_gma_miR5992
Species Glycine max
Class miRNA
Genome position Chr1:2415641-2415732 [+]
Reference genome Glycine_max_v2.0
Source SRR835768
Length 21
Mature sequence(if miRNA) 1 - UCUGAAGGACUUUGUUCGGCU - 21
Stem-loop(if miRNA) --                           G   CU      -   A
  UCUGAAGGACUUUGUUCGGCUUGUAAU AGG  GGGCUA GAA U
  ||||||||||||||||||||||||||| |||  |||||| ||| A
  AGACUUCCUGAAACAAGCCGAACGUUG UUC  UUUGGU CUU A
CU                           G   UU      A   A
Stem-loop sequence UCUGAAGGACUUUGUUCGGCUUGUAAUGAGGCUGGGCUAGAAAUAAAUUCAUGGUUUUUCUUGGUUGCAAGCCGAACAAAGUCCUUCAGAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006606362.2
ncRNA:21   UCGGCUUGUUUCAGGAAGUCU   1
  **||||||||*|||||||||*
targets:2263   UACCGAACAAUGUCCUUCAGU   2283

2.5 PREDICTED: Glycine max type II inositol polyphosphate 5-phosphatase 15-like (LOC100801342), mRNA type II inositol polyphosphate 5-phosphatase 15-like(LOC100801342) coding protein psRNATarget
XM_003536117.3
ncRNA:21   UCGGCUUGUUUCAGGAAGUCU   1
  **||||||||*|||||||||*
targets:2356   UACCGAACAAUGUCCUUCAGU   2376

2.5 PREDICTED: Glycine max type II inositol polyphosphate 5-phosphatase 15-like (LOC100805728), mRNA type II inositol polyphosphate 5-phosphatase 15-like(LOC100805728) coding protein psRNATarget