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BaseInfo

ncRNA ID	novel_gma_miR5989
Species	Glycine max
Class	miRNA
Genome position	Chr20:10735568-10735705 [+]
Reference genome	Glycine_max_v2.0
Source	SRR835768
Length	21
Mature sequence(if miRNA)	118 - AAGGAUAAAAAUGACUAUUUA - 138
Stem-loop(if miRNA)	--                                     C     UA    C   UAUUGCUAAUGAAA   AAUAGUCAUUUUUAUCCUUGGAUGUGUAGAGUGUUGA AAAUU  UUUU GGU              G   ||||||||||||||||||||||||||||||||||||| |||||  |||| |||   UUAUCAGUAAAAAUAGGAACUUACACAUCUCGCGACU UUUAA  AGGA CUU              A AU                                     A     GC    A   ACACUAUACAUUUG
Stem-loop sequence	AAUAGUCAUUUUUAUCCUUGGAUGUGUAGAGUGUUGACAAAUUUAUUUUCGGUUAUUGCUAAUGAAAGAGUUUACAUAUCACAUUCAAGGACGAAUUUAUCAGCGCUCUACACAUUCAAGGAUAAAAAUGACUAUUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003531341.3	ncRNA:21   AUUUAUCAGUAAAAAUAGGAA   1   ||||||||||*|||||||||| targets:601   UAAAUAGUCACUUUUAUCCUU   621 Target Full Sequence	1.5	PREDICTED: Glycine max mediator of RNA polymerase II transcription subunit 28-like (LOC100789247), mRNA	mediator of RNA polymerase II transcription subunit 28-like(LOC100789247)	coding protein	psRNATarget
XM_003542691.3	ncRNA:21   AUUUAUCAGUAAAAAUAGGAA   1   ||*|||||||||||||||||* targets:657   UAUAUAGUCAUUUUUAUCCUA   677 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100775323 (LOC100775323), transcript variant X1, mRNA	uncharacterized LOC100775323(LOC100775323)	coding protein	psRNATarget
XM_006581296.2	ncRNA:21   AUUUAUCAGUAAAAAUAGGAA   1   *|||||*|||||||||*|||| targets:1715   AAAAUAUUCAUUUUUAGCCUU   1735 Target Full Sequence	2.5	PREDICTED: Glycine max RNA-dependent RNA polymerase 6 (LOC100795178), transcript variant X2, mRNA	RNA-dependent RNA polymerase 6(LOC100795178)	coding protein	psRNATarget
XM_003526362.3	ncRNA:21   AUUUAUCAGUAAAAAUAGGAA   1   *|||||*|||||||||*|||| targets:1852   AAAAUAUUCAUUUUUAGCCUU   1872 Target Full Sequence	2.5	PREDICTED: Glycine max RNA-dependent RNA polymerase 6 (LOC100795178), transcript variant X1, mRNA	RNA-dependent RNA polymerase 6(LOC100795178)	coding protein	psRNATarget
XM_003522570.3	ncRNA:21   AUUUAUCAGUAAAAAUAGGAA   1   *|||||*|||||||||*|||| targets:1945   AAAAUAUUCAUUUUUAGCCUU   1965 Target Full Sequence	2.5	PREDICTED: Glycine max RNA-dependent RNA polymerase 6-like (LOC100807347), transcript variant X2, mRNA	RNA-dependent RNA polymerase 6-like(LOC100807347)	coding protein	psRNATarget
XM_006578085.2	ncRNA:21   AUUUAUCAGUAAAAAUAGGAA   1   *|||||*|||||||||*|||| targets:1954   AAAAUAUUCAUUUUUAGCCUU   1974 Target Full Sequence	2.5	PREDICTED: Glycine max RNA-dependent RNA polymerase 6-like (LOC100807347), transcript variant X1, mRNA	RNA-dependent RNA polymerase 6-like(LOC100807347)	coding protein	psRNATarget