ncRNA ID | novel_gma_miR5983 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:9558704-9558770 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835768 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUUGGAUAGCAGAUUGAAUUU - 21 |
Stem-loop(if miRNA) |
--   UG     -G         -----       G   AUU  AUUUG  AUUUAGAUU     UGAUUUG A   |||  |||||  |||||||||     ||||||| U   UAA  UAGAC  UAGGUUUAG     AUUAGAC A UU   GU     GA         UUCAG       A |
Stem-loop sequence | AUUUGAUUUGGAUUUAGAUUUGAUUUGGAUAACAGAUUAGACUUGAUUUGGAUAGCAGAUUGAAUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006587120.2 |
|
2.5 | PREDICTED: Glycine max histone-lysine N-methyltransferase ATXR4 (LOC100801270), transcript variant X4, mRNA | histone-lysine N-methyltransferase ATXR4(LOC100801270) | coding protein | psRNATarget |